ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 1.3.19

Subclass Accession number: 2139
Subclass: 1.3.19

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 6.1 +/- 0.0
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 45-90

rho (°): 90-135

Consensus Sequence:	pSGXX
(φψ)-conformation:	aalaa

Pattern:	[IP]	[LY]	[AS]	[CR]	[AV]	[AK]	[AN]	[KN]	[AF]	[DS]	[FL]	[AV]	[IM]	x	[DE]	[S]	[G]	[DV]	[KW]	[NQ]	[NQ]	[PQ]	[IV]	[AG]	[DK]	[AI]	x	[TV]	x	x	[QR]	[AE]	x
Conservation:	-0.867	0.034	0.259	-0.191	-0.191	-0.417	-0.642	0.485	-0.642	0.259	0.259	-0.191	0.485	-1.543	1.386	1.611	3.414	-1.093	0.259	0.485	0.485	0.259	1.161	0.259	0.034	-0.642	-1.318	0.034	-1.318	-1.543	0.710	-0.417	-0.867

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1knz_A_39	1knz	A	42	74	IYSRVKNKFDFVMDDSGVKNNPIGKAITIDQAL	HHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaavaaaaaaaaaaaaaaaa
1s0a_A_314	1s0a	A	314	346	PLACAAANASLAILESGDWQQQVADIEVQLREQ	HHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaavaaaaaaaaaaaaaaaa

Clusters included in this Subclass