Information on SUBCLASS 2.1.19 |
Subclass Accession number: 2178
Subclass: 2.1.19 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48370 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 8.9 +/- 11.8 Average RMSD (Å) : 0.620 +/- 0.148 Consensus geometry
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Consensus Sequence: | hXhpXX |
(φψ)-conformation: | aappaa |
Pattern: | x | [EGKNQ] | x | [aiv] | [krst] | [anst] | [FLY] | [EQRS] | [ekq] | [filt] | [gkr] | [APQ] | x | [FGLM] | [DHSY] | [DKNP] | x | [EQT] | [ailv] |
Conservation: | -1.104 | 0.165 | -1.558 | 0.325 | -0.589 | -0.481 | 1.864 | 1.268 | 0.432 | -0.804 | -0.589 | 1.846 | -0.966 | -0.455 | 0.207 | 0.414 | -0.895 | 1.296 | -0.374 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aua_*_219 | 1aua | - | 219 | 237 | FGFSTAFRLFKPFLDPVTV | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1b3u_A_533 | 1b3u | A | 537 | 555 | FNVAKSLQKIGPILDNSTL | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1giq_A_46 | 1giq | A | 46 | 64 | SEQISNYSQTRQYFYDYQI | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1hs6_A_581 | 1hs6 | A | 582 | 600 | DQAVRTYQEHKASMHPVTA | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1nzn_A_51 | 1nzn | A | 55 | 73 | RKGIVLLEELLPKGSKEEQ | HHHHHHHHHHTTTS-HHHH | aaaaaaaaaaaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aua_*_219 | 1aua | * | BOGB-OCTYLGLUCOSIDE | F - 221 |
1aua_*_219 | 1aua | * | BOGB-OCTYLGLUCOSIDE | T - 236 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | N - 51 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | D - 52 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | D - 53 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | R - 55 |
Clusters included in this Subclass |
CLUSTER: HH.4.172 |
CLUSTER: HH.5.61 |
CLUSTER: HH.6.46 |