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Information on SUBCLASS 2.1.19
Subclass Accession number: 2178
Subclass: 2.1.19 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 48370 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 8.9 +/- 11.8
Average RMSD (Å) : 0.620 +/- 0.148

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXhpXX
(φψ)-conformation: aappaa
Pattern: x[EGKNQ]x[aiv][krst][anst][FLY][EQRS][ekq][filt][gkr][APQ]x[FGLM][DHSY][DKNP]x[EQT][ailv]
Conservation:-1.1040.165-1.5580.325-0.589-0.4811.8641.2680.432-0.804-0.5891.846-0.966-0.4550.2070.414-0.8951.296-0.374
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aua_*_2191aua   -219237FGFSTAFRLFKPFLDPVTVHHHHHHHHHHGGGS-HHHHaaaaaaaaaaaaaxxaaaa
1b3u_A_5331b3u   A537555FNVAKSLQKIGPILDNSTLHHHHHHHHHHGGGS-HHHHaaaaaaaaaaaaaxxaaaa
1giq_A_461giq   A4664SEQISNYSQTRQYFYDYQIHHHHHHHHHHGGGS-HHHHaaaaaaaaaaaaaxxaaaa
1hs6_A_5811hs6   A582600DQAVRTYQEHKASMHPVTAHHHHHHHHHHGGGS-HHHHaaaaaaaaaaaaaxxaaaa
1nzn_A_511nzn   A5573RKGIVLLEELLPKGSKEEQHHHHHHHHHHTTTS-HHHHaaaaaaaaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aua_*_2191aua   *     BOGB-OCTYLGLUCOSIDE F - 221
1aua_*_2191aua   *     BOGB-OCTYLGLUCOSIDE T - 236
1nzn_A_511nzn   A     GOLGLYCEROL N - 51
1nzn_A_511nzn   A     GOLGLYCEROL D - 52
1nzn_A_511nzn   A     GOLGLYCEROL D - 53
1nzn_A_511nzn   A     GOLGLYCEROL R - 55

Clusters included in this Subclass
CLUSTER: HH.4.172
CLUSTER: HH.5.61
CLUSTER: HH.6.46