ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.1.34

Subclass Accession number: 2193
Subclass: 2.1.34

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  2 (>75 %)  3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.14 7 (>75 %)
GO : GO:0003899 (>75 %)  GO:0016772 (>75 %)  GO:0016779 (>75 %)
SCOP : 51445 (>75 %)  51534 (>75 %)  56746 (>75 %)  56747 (>75 %)  56748 (>75 %)

Number of loops: 3

Average sequence ID (%) : 9.1 +/- 12.5
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	XXXhXX
(φψ)-conformation:	aappaa

Pattern:	x	x	x	x	x	[AKN]	x	x	[LP]	[AE]	x	[AE]	[HK]	[DET]	[AIL]	x	x	[NQ]	x	x	[AES]	x
Conservation:	-1.053	-0.311	-0.905	-0.163	-1.053	-0.311	-0.459	-0.459	1.136	1.222	-0.756	0.821	1.876	0.728	0.134	-0.459	0.693	2.195	-0.756	-0.905	0.283	-1.498

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1knc_A_3	1knc	A	3	24	IEKLKAALPEYAKDIKLNLSSI	HHHHHHHS-GGGHHHHHHHHHH	aaaaaaapxaaaaaaaaaaaaa
1ocx_A_19	1ocx	A	31	52	LIHRYNHSLAEEHTLRQQILAD	HHHHHHHS-TT-HHHHHHHHHH	aaaaaaaxxaaaaaaaaaaaaa
2gsq_*_81	2gsq	-	100	121	DVVKIKFAPEAAKEAVQQNYEK	HHHHHHTS-TTSHHHHHHHHHH	aaaaaaabpaaNaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	F - 98
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	N - 99
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	V - 102
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	K - 103
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	I - 104
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	F - 106
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	A - 107
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	P - 108
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	A - 111
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	A - 114
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	V - 115
2gsq_*_81	2gsq	*	GBIS-(3-IODOBENZYL)GLUTATHIONE	N - 118

Clusters included in this Subclass

CLUSTER: HH.4.264

CLUSTER: HH.5.96

CLUSTER: HH.7.19