|
|
|
|
|
|
|
| Information on SUBCLASS 2.1.39 |
|
Subclass Accession number: 2198
Subclass: 2.1.39 
Type: HH alpha-alpha DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 3.9 +/- 8.0 Average RMSD (Å) : 0.633 +/- 0.115 Consensus geometry
|
| Consensus Sequence: | XXhXXX |
| (φψ)-conformation: | aappaa |
| Pattern: | x | x | [ADR] | [ALY] | [KLV] | [EGK] | x | x | x | [AST] | [AE] | [ACY] | [AEP] | [ADQ] | x | x | [GRS] |
| Conservation: | -0.281 | -0.337 | -0.476 | -0.086 | -0.086 | 0.498 | -1.840 | 0.109 | -0.671 | 1.862 | 1.825 | 0.888 | 0.498 | 0.303 | -0.865 | -1.645 | 0.303 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1htj_F_443 | 1htj | F | 453 | 469 | QLAALGDILSAYAADRS | HHHHHHHHHHTS-HHHH | aaaaaaaaaaaxpaaaa |
| 1ihg_A_239 | 1ihg | A | 249 | 265 | VLRYVEGSRAAAEDADG | HHHHHHHHHHHS-HHHH | aaaaaaaaaaaxxaaaa |
| 1mr8_A_31 | 1mr8 | A | 31 | 47 | RDDLKKLLETECPQYIR | HHHHHHHHHHHS-HHHH | aaaaaaaaaaabxaaaa |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | A - 450 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | L - 454 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | L - 457 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | I - 460 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | L - 461 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | Y - 464 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | R - 468 |
| 1htj_F_443 | 1htj | F | MSESELENOMETHIONINE | S - 469 |
| 1ihg_A_239 | 1ihg | A | GOLGLYCEROL | R - 251 |
| 1ihg_A_239 | 1ihg | A | GOLGLYCEROL | E - 254 |
| 1mr8_A_31 | 1mr8 | A | OC1CALCIUM ION, 1 WATER COORDINATED | D - 33 |
| Clusters included in this Subclass |
| CLUSTER: HH.2.178 |
| For any comment or web-related incidence, send an email to the webmaster. |
|