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Information on SUBCLASS 2.1.42
Subclass Accession number: 2201
Subclass: 2.1.42 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.0 +/- 10.7
Average RMSD (Å) : 0.833 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXXXXp
(φψ)-conformation: aappaa
Pattern: xx[AV]xx[AR]x[NP]x[QRY][DGV][FIM]x[HN][ADS][HIL][GKL]xx
Conservation:0.069-0.1511.024-0.261-0.8110.695-0.5911.386-0.7010.288-0.9210.728-0.8112.7930.179-0.261-1.251-0.261-1.141
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1mkm_A_631mkm   A6987SFVLRRFNIRDIAHDHLVDHHHHHH--HHHHHHHHHHHaaaaaaxbaaaaaaaaaaa
1pkl_A_3391pkl   A351369LEAQSALNEYVFFNSIKKLHHHHHH--HHHHHHHHHHHaaaaaaxxaaaaaaaaaaa
2lig_A_1462lig   A146164MDAYFAQPTQGMQNALGEAHHHHHHS-HHHHHHHHHHHaaaaaaxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mkm_A_631mkm   A     FMTFORMIC ACID L - 64
1mkm_A_631mkm   A     FMTFORMIC ACID I - 65
1mkm_A_631mkm   A     FMTFORMIC ACID Y - 67
1mkm_A_631mkm   A     FMTFORMIC ACID G - 68
1mkm_A_631mkm   A     FMTFORMIC ACID S - 69
1mkm_A_631mkm   A     FMTFORMIC ACID L - 72
2lig_A_1462lig   A     PHN1,10-PHENANTHROLINE Y - 176

Clusters included in this Subclass
CLUSTER: HH.1.100