Information on SUBCLASS 2.3.5 |
Subclass Accession number: 2223
Subclass: 2.3.5 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 13.5 +/- 14.9 Average RMSD (Å) : 0.675 +/- 0.249 Consensus geometry
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Consensus Sequence: | XXXphp |
(φψ)-conformation: | aabpaa |
Pattern: | [aklv] | [DEHPRST] | [ADERT] | [lmvy] | [aflm] | [akrs] | x | x | [DNPST] | x | [DENR] | [deqrty] | [AILMVY] | x |
Conservation: | -0.167 | -0.562 | 0.775 | 0.276 | 0.003 | 0.524 | -1.716 | -0.394 | 0.815 | -0.477 | 2.240 | -0.982 | 0.747 | -1.083 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aua_*_131 | 1aua | - | 131 | 144 | LHEMNKVTSEERML | HHHHTTT--HHHHH | aaaaaaabbaaaaa |
1c3p_A_54 | 1c3p | A | 54 | 67 | KEELLLFHTEDYIN | HHHHTTTS-HHHHH | aaaaaaaxxaaaaa |
1i39_A_66 | 1i39 | A | 69 | 82 | LDERMAAKTINEIL | HHHHTTTS-HHHHH | aaaaaaabxaaaaa |
1i60_A_38 | 1i60 | A | 39 | 52 | LPEYLKDHSLDDLA | HHHHTTSS-HHHHH | aaaaaaabbaaaaa |
1li5_A_277 | 1li5 | A | 277 | 290 | VRDVLKYYDAETVR | HHHHHTTS-HHHHH | aaaaaaabxaaaaa |
1lva_A_466 | 1lva | A | 470 | 483 | RSRYFSRLPARVYQ | HHHH-TTS-HHHHH | aaaaaaaxxaaaaa |
1ov9_A_10 | 1ov9 | A | 13 | 26 | LRAYARELTIEQLE | HHHHHTTS-HHHHH | aaaaaaabxaaaaa |
3gcb_*_21 | 3gcb | - | 26 | 39 | ATTVLKNYNADDAL | HHHHHTTS-HHHHH | aaaaaaabpaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aua_*_131 | 1aua | * | BOGB-OCTYLGLUCOSIDE | Y - 151 |
1i60_A_38 | 1i60 | A | MSESELENOMETHIONINE | K - 38 |
1i60_A_38 | 1i60 | A | MSESELENOMETHIONINE | L - 39 |
1i60_A_38 | 1i60 | A | MSESELENOMETHIONINE | P - 40 |
1lva_A_466 | 1lva | A | Y1YTTRIUM ION | A - 484 |
1lva_A_466 | 1lva | A | Y1YTTRIUM ION | E - 487 |
Clusters included in this Subclass |
CLUSTER: HH.4.168 |
CLUSTER: HH.4.273 |
CLUSTER: HH.5.63 |
CLUSTER: HH.6.51 |