Information on SUBCLASS 2.4.3 |
Subclass Accession number: 2237
Subclass: 2.4.3 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.9 +/- 17.6 Average RMSD (Å) : 0.640 +/- 0.089 Consensus geometry
|
Consensus Sequence: | pppDhp |
(φψ)-conformation: | aalbaa |
Pattern: | [lv] | [enr] | [AEGN] | [ACIL] | [agil] | [AKR] | [hrt] | x | [DE] | [FPVW] | [aert] | [egst] | [ALV] | [KLV] | [ART] | [FIY] |
Conservation: | -0.119 | -0.486 | -0.336 | 0.092 | -1.193 | 0.847 | -0.547 | -0.203 | 2.987 | -0.814 | -0.817 | -1.022 | 0.341 | 0.137 | 0.377 | 0.756 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f7u_A_534 | 1f7u | A | 538 | 553 | LRNAIKTHEPTTVVTY | HHHHHHH--HHHHHHH | aaaaaaavbaaaaaaa |
1iex_A_112 | 1iex | A | 112 | 127 | NVGLGATRDPYLVKRI | HHHHHHHT-HHHHHHH | aaaaaaalbaaaaaaa |
1qsa_A_69 | 1qsa | A | 79 | 94 | VNELARREDWRGLLAF | HHHHHHTT-HHHHHHH | aaaaaaavxaaaaaaa |
1tgo_A_617 | 1tgo | A | 627 | 642 | LEAILKHGDVEEAVRI | HHHHHTT--HHHHHHH | aaaaaaavbaaaaaaa |
1v54_E_45 | 1v54 | E | 52 | 67 | LRACRRLNDFASAVRI | HHHHHHTT-HHHHHHH | aaaaaaalbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f7u_A_534 | 1f7u | A | DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE | N - 540 |
1f7u_A_534 | 1f7u | A | DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE | K - 543 |
Clusters included in this Subclass |
CLUSTER: HH.3.112 |