ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.15.1

Subclass Accession number: 2263
Subclass: 2.15.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  2 (>75 %)  3 (>75 %)
GO : GO:0004553 (>50 %)  GO:0016798 (>50 %)  GO:0016798 (>75 %)
SCOP : 48149 (>75 %)  48150 (>75 %)  48154 (>75 %)  51350 (>75 %)  51445 (>50 %)  51446 (>50 %)

Number of loops: 4

Average sequence ID (%) : 24.4 +/- 18.7
Average RMSD (Å) : 0.350 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	XhGLYp
(φψ)-conformation:	aaelaa

Pattern:	x	[ERS]	[DEK]	[ILV]	[AES]	[EKQ]	x	[ILV]	[KR]	[EPS]	x	[G]	[FL]	[SY]	[DNR]	x	[KR]	[A]	[EKR]	[NQRT]	[IL]	x	[DEK]	[FL]	[ACS]	[ADGR]	x	[ILVY]	[IL]	[DKNT]
Conservation:	-1.219	-0.573	0.304	0.416	-0.435	0.470	-1.342	0.577	1.101	-0.325	-0.717	3.034	0.355	0.750	-0.011	-0.922	1.101	1.487	0.359	-0.687	0.714	-1.427	0.068	0.334	-0.218	-1.364	-1.412	-0.398	0.714	-0.736

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1kea_A_75	1kea	A	75	104	KSEIAKDIKEIGLSNQRAEQLKELARVVIN	HHHHHHHTGGGS-HHHHHHHHHHHHHHHHH	aaaaaaaaaaaelaaaaaaaaaaaaaaaSN
1ngn_A_470	1ngn	A	470	499	WRDVSELLKPLGLYDLRAKTIIKFSDEYLT	HHHHHHHTGGGS-HHHHHHHHHHHHHHHHH	aaaaaaaaaaaelaaaaaaaaaaaaaaaaa
1orn_A_70	1orn	A	70	99	LEELEQDIRSIGLYRNKARNIQKLCAMLID	HHHHHHHTGGGSSHHHHHHHHHHHHHHHHH	aaaaaaaaaaaelaaaaaaaaaaaaaaaaa
1pu6_A_77	1pu6	A	77	106	FSKLAECVRPSGFYNQKAKRLIDLSGNILK	HHHHHHHTGGGS-HHHHHHHHHHHHHHHHH	aaaaaaaaaaaelaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1kea_A_75	1kea	A	ACTACETATE ION	L - 87
1kea_A_75	1kea	A	ACTACETATE ION	Q - 90
1kea_A_75	1kea	A	ACTACETATE ION	I - 103

Clusters included in this Subclass

CLUSTER: HH.5.125