Information on SUBCLASS 3.1.3 |
Subclass Accession number: 2268
Subclass: 3.1.3 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) |
Number of loops: 8 Average sequence ID (%) : 12.3 +/- 15.0 Average RMSD (Å) : 0.775 +/- 0.205 Consensus geometry
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Consensus Sequence: | XXchXXp |
(φψ)-conformation: | aalbpaa |
Pattern: | x | [dgkqr] | x | x | [DGKS] | [FILMVY] | [apst] | x | [AEQT] | [denqr] | [altv] |
Conservation: | -0.772 | -0.506 | -0.572 | -0.757 | 1.587 | 1.246 | 0.180 | -1.692 | 1.112 | 0.205 | -0.031 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ew0_A_164 | 1ew0 | A | 167 | 177 | VRQFGYAEEEV | HHHH---HHHH | aaaavbxaaaa |
1fxx_A_61 | 1fxx | A | 64 | 74 | VLITGITPQEA | HHHH---HHHH | aaaavbxaaaa |
1i27_A_479 | 1i27 | A | 479 | 489 | TKKTGLSSEQT | HHHH---HHHH | aaaavxxaaaa |
1j54_A_60 | 1j54 | A | 63 | 73 | FGVHGIADEFL | HHHH---HHHH | aaaavxxaaaa |
1n00_A_281 | 1n00 | A | 289 | 299 | QRRNSVPLTRA | HHHHSS-HHHH | aaaavbxaaaa |
1olt_A_385 | 1olt | A | 389 | 399 | EQQWDLLFADY | HHHTT--HHHH | aaaalbbaaaa |
1oyj_A_176 | 1oyj | A | 180 | 190 | ERCGGFSVEEV | HHHHT--HHHH | aaaavbbaaaa |
1tx4_A_185 | 1tx4 | A | 185 | 195 | SDQNKMTNTNL | HHHH---HHHH | aaaavbxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ew0_A_164 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 170 |
1j54_A_60 | 1j54 | A | TMPTHYMIDINE-5'-PHOSPHATE | E - 61 |
1j54_A_60 | 1j54 | A | TMPTHYMIDINE-5'-PHOSPHATE | A - 62 |
1j54_A_60 | 1j54 | A | TMPTHYMIDINE-5'-PHOSPHATE | V - 65 |
1j54_A_60 | 1j54 | A | TMPTHYMIDINE-5'-PHOSPHATE | H - 66 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | F - 176 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | Y - 177 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | E - 180 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | S - 186 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | V - 187 |
1oyj_A_176 | 1oyj | A | GOLGLYCEROL | E - 188 |
1oyj_A_176 | 1oyj | A | MGMAGNESIUM ION | E - 189 |
1oyj_A_176 | 1oyj | A | MGMAGNESIUM ION | V - 190 |
Clusters included in this Subclass |
CLUSTER: HH.4.60 |