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Information on SUBCLASS 3.6.3
Subclass Accession number: 227
Subclass: 3.6.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
Number of loops: 6

Average sequence ID (%) : 11.9 +/- 12.8
Average RMSD (Å) : 0.667 +/- 0.137

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhchXXX
(φψ)-conformation: aagpabb
Pattern: [cekqr][gilvy][alp][alvy]x[al][GNR][AFIV][DEGP]x[iltv][klt][AGILY][cfglw]
Conservation:-0.479-0.893-0.133-0.419-0.6211.4972.2380.4280.832-0.8610.2870.251-0.821-1.307
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2n_A_5571d2n   A563576KIAEESNFPFIKICHHHHHHT-SEEEEEaaaaaavxabbbbx
1ed8_A_1911ed8   A193206EQLLNARADVTLGGHHHHHH--SEEEEEaaaaaalxabbbex
1jw9_B_411jw9   B4861QYLASAGVGNLTLLHHHHHHT-SEEEEEaaaaaagxabbbbb
1ne2_A_611ne2   A6477CGSYLLGAESVTAFHHHHHTTBSEEEEEaaaaaavxabbbbb
1psw_A_951psw   A95108LVPLFAGIPHRTGWHHHHHTT-SEEEEEaaaaaavxabbbex
1vhh_*_1591vhh   -164177RLAVEAGFDWVYYEHHHHHTT-SEEEEEaaaaaagxabbbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d2n_A_5571d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 557
1d2n_A_5571d2n   A     MGMAGNESIUM ION K - 557
1d2n_A_5571d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 558
1d2n_A_5571d2n   A     MGMAGNESIUM ION T - 558
1d2n_A_5571d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 559
1d2n_A_5571d2n   A     MGMAGNESIUM ION A - 559
1d2n_A_5571d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 560
1ne2_A_611ne2   A     MSESELENOMETHIONINE L - 62
1ne2_A_611ne2   A     MSESELENOMETHIONINE A - 71
1ne2_A_611ne2   A     MSESELENOMETHIONINE E - 72
1ne2_A_611ne2   A     MSESELENOMETHIONINE S - 73
1ne2_A_611ne2   A     MSESELENOMETHIONINE T - 75
1ne2_A_611ne2   A     MSESELENOMETHIONINE A - 76
1ne2_A_611ne2   A     MSESELENOMETHIONINE F - 77
1psw_A_951psw   A     MSESELENOMETHIONINE V - 96
1vhh_*_1591vhh   *     ZNZINC ION E - 177

Clusters included in this Subclass
CLUSTER: HE.4.73