Information on SUBCLASS 3.2.1 |
Subclass Accession number: 2275
Subclass: 3.2.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 39 Average sequence ID (%) : 12.8 +/- 14.5 Average RMSD (Å) : 0.759 +/- 0.248 Consensus geometry
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Consensus Sequence: | XXchXXp |
(φψ)-conformation: | aalppaa |
Pattern: | x | x | x | [adeknqrst] | x | [dgknqs] | [afilmvwy] | [adgnpst] | x | [adegkrs] | [adekqr] | [acfgilmvy] | x |
Conservation: | -0.595 | -0.254 | -0.651 | 0.127 | -0.862 | 2.137 | 0.551 | 0.557 | -1.474 | 0.499 | 0.540 | 0.793 | -1.369 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_A_486 | 1a9x | A | 491 | 503 | QLKRKGFADARLA | HHHHTT--HHHHH | aaaaavxxaaaaa |
1afw_A_186 | 1afw | A | 193 | 205 | VAANFKISRKDQD | HHHHTT--HHHHH | aaaaalxxaaaaa |
1b0b_*_82 | 1b0b | - | 95 | 107 | NHKARGISAGQLE | HHHHTT--HHHHH | aaaaavxxaaaaa |
1b0n_A_76 | 1b0n | A | 84 | 96 | DAMTSGVSKKQFR | HHHHS---HHHHH | aaaaavxxaaaaa |
1b0n_B_13 | 1b0n | B | 21 | 33 | EAKEANISPEEIR | HHHHTT--HHHHH | aaaaavxxaaaaa |
1b8d_A_113 | 1b8d | A | 116 | 128 | VYRALNLPGSAYI | HHHHTT--HHHHH | aaaaalbxaaaaa |
1bf6_A_265 | 1bf6 | A | 268 | 280 | QLRQSGFSQADVD | HHHHTT--HHHHH | aaaaagxxaaaaa |
1dmh_A_28 | 1dmh | A | 44 | 56 | AIEDLNITSDEYW | HHHHTT--HHHHH | aaaaalxxaaaaa |
1dnp_A_38 | 1dnp | A | 40 | 52 | QWATHNMSPRQAE | HHHHTT--HHHHH | aaaaavpxaaaaa |
1eex_A_453 | 1eex | A | 462 | 474 | EIINKNRNGLEVV | HHHHTT--HHHHH | aaaaalxxaaaaa |
1ez4_A_211 | 1ez4 | A | 214 | 226 | VAKEQGVSDDDLA | HHHHTT--HHHHH | aaaaavbxaaaaa |
1fec_A_433 | 1fec | A | 442 | 454 | ICLKMGAKISDFY | HHHHTT-BHHHHH | aaaaavpbaaaaa |
1fs7_A_287 | 1fs7 | A | 287 | 299 | IHGQKGVSCADCH | HHHHTT--HHHHH | aaaaavxxaaaaa |
1g2y_A_14 | 1g2y | A | 15 | 27 | ALLESGLSKEALI | HHHHTT--HHHHH | aaaaagxxaaaaa |
1gvh_A_75 | 1gvh | A | 84 | 96 | KHTSFQIKPEQYN | HHHHTT--HHHHH | aaaaalxbaaaaa |
1hlb_*_98 | 1hlb | - | 103 | 115 | THDLNKVGADHYN | HHHHTT--HHHHH | aaaaalxbaaaaa |
1j09_A_253 | 1j09 | A | 255 | 267 | WYKAEGFLPEALR | HHHHTT--HHHHH | aaaaavxxaaaaa |
1jeh_A_430 | 1jeh | A | 439 | 451 | LALEYGASAEDVA | HHHHTT-BHHHHH | aaaaavxxaaaaa |
1k6k_A_38 | 1k6k | A | 43 | 55 | ALEACSVDLVALR | HHHHTT--HHHHH | aaaaalxxaaaaa |
1kl1_A_361 | 1kl1 | A | 362 | 374 | AVTTRGFGLEEMD | HHHHTT--HHHHH | aaaaagxbaaaaa |
1knc_A_131 | 1knc | A | 140 | 152 | TLRTVGVDREAIF | HHHHTT--HHHHH | aaaaavxxaaaaa |
1ld8_A_131 | 1ld8 | A | 140 | 152 | LLKSLQKDLHEEM | HHHHTT--HHHHH | aaaaalxxaaaaa |
1m3k_A_157 | 1m3k | A | 164 | 176 | VAKQWQLSRDEQD | HHHHTT--HHHHH | aaaaalbxaaaaa |
1mo9_A_475 | 1mo9 | A | 483 | 495 | VLIKQGLTVDELG | HHHHTT-BHHHHH | aaaaagpbaaaaa |
1mwv_A_460 | 1mwv | A | 469 | 481 | KVLASGLTVSQLV | HHHHTT--HHHHH | aaaaavpxaaaaa |
1nhp_*_400 | 1nhp | - | 406 | 418 | LAIQAKMTIEDLA | HHHHTT-BHHHHH | aaaaavxbaaaaa |
1nnw_A_227 | 1nnw | A | 232 | 244 | RIRAEGLPEEIIK | HHHHHT--HHHHH | aaaaavxpaaaaa |
1nv8_A_60 | 1nv8 | A | 71 | 83 | EKRASGYPLHYIL | HHHHTT--HHHHH | aaaaagpxaaaaa |
1o8a_A_301 | 1o8a | A | 304 | 316 | AMLKQGWTPRRMF | HHHHTT--HHHHH | aaaaalxbaaaaa |
1ols_A_116 | 1ols | A | 118 | 130 | VLMYRDYPLELFM | HHHHTT--HHHHH | aaaaavxxaaaaa |
1or4_A_110 | 1or4 | A | 122 | 134 | IHLRIGLLPKWYM | HHHHTT--HHHHH | aaaaavxxaaaaa |
1owl_A_349 | 1owl | A | 359 | 371 | LTKDLIIDWRRGE | HHHTS---THHHH | aaaaalbpaaaaa |
1pk5_A_441 | 1pk5 | A | 456 | 468 | RLRSLQFDQREFV | HHHHTT--HHHHH | aaaaavpbaaaaa |
1r5q_A_33 | 1r5q | A | 42 | 54 | AVFCANIPVPEII | HHHHTT--HHHHH | aaaaalxxaaaaa |
1rkx_A_322 | 1rkx | A | 334 | 346 | KNWLSGTDMHEYS | HHHHTT--HHHHH | aaaaavxxaaaaa |
1ujp_A_230 | 1ujp | A | 234 | 246 | RALEEGRSLAPLL | HHHHTT--HHHHH | aaaaavxxaaaaa |
1umd_A_98 | 1umd | A | 100 | 112 | LALALGIPLKELL | HHHHHT--HHHHH | aaaaagxpaaaaa |
1uok_*_386 | 1uok | - | 395 | 407 | KVMERGEDIEKVM | HHHTS---HHHHH | aaaaavxxaaaaa |
3grs_*_440 | 3grs | - | 449 | 461 | VAVKMGATKADFD | HHHHTT-BHHHHH | aaaaavxbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gvh_A_75 | 1gvh | A | AC2HEM BINDING SITE FOR CHAIN A | I - 81 |
1gvh_A_75 | 1gvh | A | AC2HEM BINDING SITE FOR CHAIN A | K - 84 |
Clusters included in this Subclass |
CLUSTER: HH.3.15 |
CLUSTER: HH.3.64 |
CLUSTER: HH.4.15 |
CLUSTER: HH.5.7 |