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Information on SUBCLASS 3.2.6
Subclass Accession number: 2280
Subclass: 3.2.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005515 (>75 %)  
Number of loops: 7

Average sequence ID (%) : 15.9 +/- 16.0
Average RMSD (Å) : 0.443 +/- 0.162

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XhXhXXX
(φψ)-conformation: aalppaa
Pattern: [ilvy][acglt][AFT]x[flvy][egk][AFL][dgpt][adnp][ade][EKQT][ITV][aegkq][CEKQRS]x
Conservation:0.299-1.0020.261-1.4010.0290.1920.437-0.864-0.2990.6821.8221.913-0.8670.068-1.271
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2z_A_551d2z   A5872LATAVKLYPDQVEQIHHHHTT--HHHHHHHaaaaalxxaaaaaaa
1h6k_A_4981h6k   A506520VAFKSKATNDEIFSIHHHHTT--HHHHHHHaaaaalxxaaaaaaa
1qv0_A_501qv0   A5064ICAKLEATPEQTKRHHHHHTT--HHHHHHHaaaaalxxaaaaaaa
1t7p_A_5181t7p   A526540YGFLYGAGDEKIGQIHHHHTT--HHHHHHHaaaaavxxaaaaaaa
1upt_B_21961upt   B21982212ITTVLKFPDDQTQKIHHHHTT--HHHHHHHaaaaalxxaaaaaaa
1v9m_A_2831v9m   A305319RRAYFGLPRAQVEEEHHHHHT--HHHHHHHaaaaavxpaaaaaaa
1vj7_A_521vj7   A6074ILADLHLDAVTVACGHHHHTT--HHHHHHHaaaaalxpaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qv0_A_501qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE I - 50
1qv0_A_501qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE H - 64
1qv0_A_501qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE V - 68
1qv0_A_501qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE F - 71
1qv0_A_501qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE F - 72
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE R - 518
1t7p_A_5181t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE K - 522
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE K - 522
1t7p_A_5181t7p   A     MGMAGNESIUM ION K - 522
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE T - 523
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE Y - 526
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE G - 527
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE Y - 530
1upt_B_21961upt   B     MSESELENOMETHIONINE K - 2196
1upt_B_21961upt   B     MSESELENOMETHIONINE V - 2197
1upt_B_21961upt   B     MSESELENOMETHIONINE I - 2198
1upt_B_21961upt   B     MSESELENOMETHIONINE T - 2199
1upt_B_21961upt   B     MSESELENOMETHIONINE F - 2204
1upt_B_21961upt   B     MSESELENOMETHIONINE Q - 2208
1upt_B_21961upt   B     MSESELENOMETHIONINE K - 2211
1upt_B_21961upt   B     MSESELENOMETHIONINE I - 2212
1upt_B_21961upt   B     MSESELENOMETHIONINE R - 2215
1upt_B_21961upt   B     MSESELENOMETHIONINE E - 2216
1upt_B_21961upt   B     MSESELENOMETHIONINE D - 2217
1upt_B_21961upt   B     MSESELENOMETHIONINE A - 2218
1upt_B_21961upt   B     MSESELENOMETHIONINE R - 2219
1vj7_A_521vj7   A     MNMANGANESE (II) ION H - 53
1vj7_A_521vj7   A     MNMANGANESE (II) ION V - 57

Clusters included in this Subclass
CLUSTER: HH.4.72