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Information on SUBCLASS 3.4.3
Subclass Accession number: 2311
Subclass: 3.4.3 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 48370 (>75 %)  
 Number of loops: 28

Average sequence ID (%) : 12.5 +/- 14.6
Average RMSD (Å) : 0.646 +/- 0.277

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpXXpXX
(φψ)-conformation: aapapaa
Pattern: xxx[aeklm][adegknqst][adegst][dekpqrst][cdehknqstw]xxx[akqrs]xx
Conservation:-1.042-0.9130.276-0.0411.1521.4070.4980.043-0.346-0.485-0.5202.092-1.370-0.752
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b3u_A_1271b3u   A132145KRLAGGDWFTSRTSHHHHT-SSHHHHHHaaaaapaxaaaaaa
1b3u_A_1591b3u   A170183RNLCSDDTPMVRRAHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1b3u_A_2441b3u   A248261RQAAEDKSWRVRYMHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1b3u_A_2821b3u   A287300QNLMKDCEAEVRAAHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1b3u_A_3651b3u   A369382LAQLKDECPEVRLNHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1b3u_A_3961b3u   A408421VELAEDAKWRVRLAHHHHT-SSHHHHHHaaaaapaxaaaaaa
1dvp_A_401dvp   A4861KKKMNSPNPHSSCYHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1dvp_A_841dvp   A92105SFLESTPHENVRQKHHHHH-S-HHHHHHaaaaaxabaaaaaa
1ee4_A_891ee4   A93106TQQLNSDDMQEQLSHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1he1_A_1441he1   A154167GIRAGSQVEESRIQHHHHH-S-HHHHHHaaaaaxabaaaaaa
1j2j_B_1721j2j   B179192ARLLKSSHPEDLRAHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1j7n_A_1681j7n   A175188NTIKNASDSDGQDLHHHHTSSSSHHHHHaaaaaxaxaaaaaa
1j7n_A_7331j7n   A741754FRLMHSTDHAERLKHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1jdh_A_1521jdh   A157170TKLLNDEDQVVVNKHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1kgn_A_1391kgn   A149162MSYYNGDDPLKKKVHHHHTSS-HHHHHHaaaaaxabaaaaaa
1kk8_A_6041kk8   A608621ALLGASKEPLVAELHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1m5w_A_1571m5w   A157170GCYADAKTDAEQAQHHHHH--SHHHHHHaaaaapabaaaaaa
1oaa_*_2051oaa   -209222LARETSKDPELRSKHHHHH-S-HHHHHHaaaaapaxaaaaaa
1oqc_A_431oqc   A5568IFSKFYPCEECAEDHHHHH-S-HHHHHHaaaaapabaaaaaa
1ovn_A_1651ovn   A177190AKQEQLTDPEQQQNHHHHH--SHHHHHHaaaaaxaxaaaaaa
1oyz_A_1611oyz   A165178INLLKDPNGDVRNWHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1poc_*_611poc   -6982DCLKNSADTISSYFHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1qgr_A_3991qgr   A414427IELMKDPSVVVRDTHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1qsa_A_5721qsa   A574587AFVESIPFSETRGYHHHHH-S-HHHHHHaaaaapaxaaaaaa
1qtr_A_1771qtr   A182195RQRLTSADPQVQLEHHHHT-S-HHHHHHaaaaaxaxaaaaaa
1r8s_E_1081r8s   E112125GDYLGEREELNLAVHHHHT--SHHHHHHaaaaaxaxaaaaaa
1ujk_A_431ujk   A5265AHKIQSPQEWEAIQHHHHT-SSHHHHHHaaaaaxaxaaaaaa
1ujk_A_601ujk   A7184ETCMKSCGKRFHDEHHHHTS--HHHHHHaaaaaxaxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1he1_A_1441he1   A     GDPGUANOSINE-5'-DIPHOSPHATE R - 146
1he1_A_1441he1   A     AF3ALUMINUM FLUORIDE R - 146
1he1_A_1441he1   A     MGMAGNESIUM ION R - 146
1he1_A_1441he1   A     AF3ALUMINUM FLUORIDE T - 150
1j2j_B_1721j2j   B     IODIODIDE ION E - 173
1j2j_B_1721j2j   B     IODIODIDE ION K - 176
1j2j_B_1721j2j   B     IODIODIDE ION M - 177
1j2j_B_1721j2j   B     IODIODIDE ION R - 180
1j7n_A_7331j7n   A     ZNZINC ION A - 734
1j7n_A_7331j7n   A     ZNZINC ION E - 735
1j7n_A_7331j7n   A     ZNZINC ION A - 738
1kgn_A_1391kgn   A     FEFE (III) ION L - 167
1kgn_A_1391kgn   A     OF3FERRIC ION, 1 WATER COORDINATED L - 167
1kgn_A_1391kgn   A     FEFE (III) ION E - 168
1kgn_A_1391kgn   A     OF3FERRIC ION, 1 WATER COORDINATED E - 168
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 205
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 206
1oaa_*_2051oaa   *     OAAOXALOACETATE ION M - 206
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 207
1oaa_*_2051oaa   *     OAAOXALOACETATE ION Q - 207
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 208
1oaa_*_2051oaa   *     OAAOXALOACETATE ION Q - 208
1oaa_*_2051oaa   *     OAAOXALOACETATE ION A - 210
1oaa_*_2051oaa   *     OAAOXALOACETATE ION R - 211
1oaa_*_2051oaa   *     OAAOXALOACETATE ION L - 223
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 56
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 60
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 62
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 64
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 65
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 66
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 68
1oqc_A_431oqc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 69
1oyz_A_1611oyz   A     MSESELENOMETHIONINE L - 167
1oyz_A_1611oyz   A     MSESELENOMETHIONINE L - 168
1oyz_A_1611oyz   A     MSESELENOMETHIONINE K - 169
1oyz_A_1611oyz   A     MSESELENOMETHIONINE R - 176
1oyz_A_1611oyz   A     MSESELENOMETHIONINE N - 177
1oyz_A_1611oyz   A     MSESELENOMETHIONINE A - 180
1poc_*_611poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE F - 67
1poc_*_611poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE F - 82
1poc_*_611poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE V - 83
1poc_*_611poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE M - 86
1poc_*_611poc   *     GEL1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE Y - 87
1qsa_A_5721qsa   A     GOLGLYCEROL A - 572
1qsa_A_5721qsa   A     GOLGLYCEROL V - 573
1qsa_A_5721qsa   A     GOLGLYCEROL A - 574
1qsa_A_5721qsa   A     GOLGLYCEROL Y - 587
1qsa_A_5721qsa   A     GOLGLYCEROL Y - 594
1qsa_A_5721qsa   A     GOLGLYCEROL D - 595
1qsa_A_5721qsa   A     GOLGLYCEROL A - 596
1qsa_A_5721qsa   A     GOLGLYCEROL R - 599
1r8s_E_1081r8s   E     SO3SULFITE ION D - 113
1ujk_A_431ujk   A     IODIODIDE ION R - 49
1ujk_A_431ujk   A     IODIODIDE ION L - 50
1ujk_A_431ujk   A     IODIODIDE ION L - 51
1ujk_A_431ujk   A     IODIODIDE ION H - 53
1ujk_A_431ujk   A     IODIODIDE ION K - 54
1ujk_A_431ujk   A     IODIODIDE ION S - 57
1ujk_A_431ujk   A     IODIODIDE ION P - 58
1ujk_A_431ujk   A     IODIODIDE ION Q - 59
1ujk_A_431ujk   A     IODIODIDE ION E - 62
1ujk_A_601ujk   A     IODIODIDE ION C - 77
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1he1_A_1441he1   A AC1GDP BINDING SITE FOR CHAIN CR - 146
1oqc_A_431oqc   A CTAPUTATIVE CATALYTIC SITEC - 62
1oqc_A_431oqc   A CTAPUTATIVE CATALYTIC SITEC - 65

Clusters included in this Subclass
CLUSTER: HH.3.16
CLUSTER: HH.4.126
CLUSTER: HH.4.42
CLUSTER: HH.5.10