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Information on SUBCLASS 3.4.5
Subclass Accession number: 2313
Subclass: 3.4.5 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 13.9 +/- 15.0
Average RMSD (Å) : 0.838 +/- 0.250

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XpXXpXp
(φψ)-conformation: aapapaa
Pattern: x[agikt][cdky][aily]x[dehkr]x[enpr][DNT]x[EQS]xxxxx[ailv][dhknrs]
Conservation:-0.228-1.093-0.949-0.050-0.051-0.002-0.657-0.0591.847-0.6622.899-0.3610.199-0.427-0.703-0.3331.021-0.391
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b3u_A_101b3u   A1532LIDELRNEDVQLRLNSIKHHHHTT-S-HHHHHHHHHaaaaaaxaxaaaaaaaaa
1ezf_A_2701ezf   A274291ITYLSRLRNQSVFNFCAIHHHHHT---HHHHHHHHHaaaaaaxaxaaaaaaaaa
1f7c_A_2751f7c   A281298FIKAAKLENQESRVSEIHHHHHHT-SSHHHHHHHHHaaaaaapaxaaaaaaaaa
1hn0_A_4501hn0   A454471LALLLLEPDDQKRINLVNHHHHHT-SSHHHHHHHHHaaaaaapaxaaaaaaaaa
1jj2_O_281jj2   O2845QGDIADAITREDVRELVDHHHHHT--SHHHHHHHHHaaaaaaxabaaaaaaaaa
1mty_G_101mty   G1633VNKIAHVNTLEKAAEMLKHHHHHT--SHHHHHHHHHaaaaaaxabaaaaaaaaa
1nvu_S_8191nvu   S836853EKCIVETENLEERVAVVSHHHHHT--SHHHHHHHHHaaaaaabaxaaaaaaaaa
1omw_A_801omw   A89106IKKYEKLETEEERLVCSRHHHHHT--SHHHHHHHHHaaaaaaxabaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Y - 276
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 288
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID C - 289
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID P - 292
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Q - 293
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID M - 295
1nvu_S_8191nvu   S     PO4PHOSPHATE ION L - 822
1nvu_S_8191nvu   S     PO4PHOSPHATE ION R - 826

Clusters included in this Subclass
CLUSTER: HH.5.35