Information on SUBCLASS 3.4.5 |
Subclass Accession number: 2313
Subclass: 3.4.5 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 13.9 +/- 15.0 Average RMSD (Å) : 0.838 +/- 0.250 Consensus geometry
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Consensus Sequence: | XpXXpXp |
(φψ)-conformation: | aapapaa |
Pattern: | x | [agikt] | [cdky] | [aily] | x | [dehkr] | x | [enpr] | [DNT] | x | [EQS] | x | x | x | x | x | [ailv] | [dhknrs] |
Conservation: | -0.228 | -1.093 | -0.949 | -0.050 | -0.051 | -0.002 | -0.657 | -0.059 | 1.847 | -0.662 | 2.899 | -0.361 | 0.199 | -0.427 | -0.703 | -0.333 | 1.021 | -0.391 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b3u_A_10 | 1b3u | A | 15 | 32 | LIDELRNEDVQLRLNSIK | HHHHTT-S-HHHHHHHHH | aaaaaaxaxaaaaaaaaa |
1ezf_A_270 | 1ezf | A | 274 | 291 | ITYLSRLRNQSVFNFCAI | HHHHHT---HHHHHHHHH | aaaaaaxaxaaaaaaaaa |
1f7c_A_275 | 1f7c | A | 281 | 298 | FIKAAKLENQESRVSEIH | HHHHHT-SSHHHHHHHHH | aaaaaapaxaaaaaaaaa |
1hn0_A_450 | 1hn0 | A | 454 | 471 | LALLLLEPDDQKRINLVN | HHHHHT-SSHHHHHHHHH | aaaaaapaxaaaaaaaaa |
1jj2_O_28 | 1jj2 | O | 28 | 45 | QGDIADAITREDVRELVD | HHHHHT--SHHHHHHHHH | aaaaaaxabaaaaaaaaa |
1mty_G_10 | 1mty | G | 16 | 33 | VNKIAHVNTLEKAAEMLK | HHHHHT--SHHHHHHHHH | aaaaaaxabaaaaaaaaa |
1nvu_S_819 | 1nvu | S | 836 | 853 | EKCIVETENLEERVAVVS | HHHHHT--SHHHHHHHHH | aaaaaabaxaaaaaaaaa |
1omw_A_80 | 1omw | A | 89 | 106 | IKKYEKLETEEERLVCSR | HHHHHT--SHHHHHHHHH | aaaaaaxabaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.35 |