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Information on SUBCLASS 3.4.6
Subclass Accession number: 2314
Subclass: 3.4.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0000287 (>75 %)  GO:0005489 (>75 %)  GO:0016168 (>75 %)  GO:0042314 (>75 %)  GO:0045156 (>75 %)  GO:0046906 (>75 %)  
SCOP : 81482 (>75 %)  81483 (>75 %)  81484 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 14.6 +/- 14.6
Average RMSD (Å) : 0.800 +/- 0.274

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XpXXphX
(φψ)-conformation: aapapaa
Pattern: [AEFKL][DEST]x[AILY][adks][ENST][hps]x[ds][AIP]xx[AY]
Conservation:-1.4611.131-0.2630.122-0.7880.997-0.906-1.1240.2391.0720.045-0.7881.724
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c0a_A_2961c0a   A296308ADLLKSVEFAVFAHHHHTT-S-HHHHaaaaaapapaaaa
1dqw_A_61dqw   A719KERAATHPSPVAAHHHHHH-S-HHHHaaaaaapaxaaaa
1otk_A_911otk   A109121FTRLMESRDPQLAHHHHTT-SSHHHHaaaaaaxaxaaaa
1oxx_K_2251oxx   K226238EDLYDNPVSIQVAHHHHHS-SSHHHHaaaaaaxabaaaa
2oat_A_1822oat   A182194LSAISSSTDPTSYHHHHTT---HHHHaaaaaaxabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE F - 304
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE V - 306
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE F - 307
1oxx_K_2251oxx   K     IODIODIDE ION P - 225
1oxx_K_2251oxx   K     IODIODIDE ION E - 226
1oxx_K_2251oxx   K     IODIODIDE ION D - 227
1oxx_K_2251oxx   K     IODIODIDE ION N - 231
1oxx_K_2251oxx   K     IODIODIDE ION V - 233
1oxx_K_2251oxx   K     IODIODIDE ION S - 234
1oxx_K_2251oxx   K     IODIODIDE ION I - 235
1oxx_K_2251oxx   K     IODIODIDE ION Q - 236
1oxx_K_2251oxx   K     IODIODIDE ION V - 237

Clusters included in this Subclass
CLUSTER: HH.4.227
CLUSTER: HH.5.126