Information on SUBCLASS 3.4.6 |
Subclass Accession number: 2314
Subclass: 3.4.6 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0000287 (>75 %) GO:0005489 (>75 %) GO:0016168 (>75 %) GO:0042314 (>75 %) GO:0045156 (>75 %) GO:0046906 (>75 %) SCOP : 81482 (>75 %) 81483 (>75 %) 81484 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 14.6 +/- 14.6 Average RMSD (Å) : 0.800 +/- 0.274 Consensus geometry
|
Consensus Sequence: | XpXXphX |
(φψ)-conformation: | aapapaa |
Pattern: | [AEFKL] | [DEST] | x | [AILY] | [adks] | [ENST] | [hps] | x | [ds] | [AIP] | x | x | [AY] |
Conservation: | -1.461 | 1.131 | -0.263 | 0.122 | -0.788 | 0.997 | -0.906 | -1.124 | 0.239 | 1.072 | 0.045 | -0.788 | 1.724 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c0a_A_296 | 1c0a | A | 296 | 308 | ADLLKSVEFAVFA | HHHHTT-S-HHHH | aaaaaapapaaaa |
1dqw_A_6 | 1dqw | A | 7 | 19 | KERAATHPSPVAA | HHHHHH-S-HHHH | aaaaaapaxaaaa |
1otk_A_91 | 1otk | A | 109 | 121 | FTRLMESRDPQLA | HHHHTT-SSHHHH | aaaaaaxaxaaaa |
1oxx_K_225 | 1oxx | K | 226 | 238 | EDLYDNPVSIQVA | HHHHHS-SSHHHH | aaaaaaxabaaaa |
2oat_A_182 | 2oat | A | 182 | 194 | LSAISSSTDPTSY | HHHHTT---HHHH | aaaaaaxabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c0a_A_296 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | F - 304 |
1c0a_A_296 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | V - 306 |
1c0a_A_296 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | F - 307 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | P - 225 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | E - 226 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | D - 227 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | N - 231 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | V - 233 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | S - 234 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | I - 235 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | Q - 236 |
1oxx_K_225 | 1oxx | K | IODIODIDE ION | V - 237 |
Clusters included in this Subclass |
CLUSTER: HH.4.227 |
CLUSTER: HH.5.126 |