Information on SUBCLASS 3.5.2 |
Subclass Accession number: 2320
Subclass: 3.5.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>50 %) SCOP : 55468 (>75 %) 55469 (>75 %) 55470 (>75 %) |
Number of loops: 10 Average sequence ID (%) : 10.6 +/- 12.5 Average RMSD (Å) : 0.750 +/- 0.178 Consensus geometry
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Consensus Sequence: | pXhppXp |
(φψ)-conformation: | aabapaa |
Pattern: | [afilpy] | x | [ADKNRT] | x | [acivw] | [gkrst] | [DENST] | x | [AEKQRS] | [aegqt] | [efkqr] | [aeknq] | [ekqry] | [AILTV] |
Conservation: | -0.845 | -1.576 | 0.487 | -0.807 | -0.417 | 0.166 | 2.197 | -0.923 | 1.315 | -0.241 | 0.141 | -0.312 | -0.224 | 1.038 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h0o_A_157 | 1h0o | A | 181 | 194 | IDTYIKDPKEREYL | HHHH---HHHHHHH | aaaabaxaaaaaaa |
1h97_A_105 | 1h97 | A | 119 | 132 | FQNLVKDAEGKAAV | HHHHSSSHHHHHHH | aaaababaaaaaaa |
1ii2_A_475 | 1ii2 | A | 475 | 488 | PRKAWKDVRQFNET | HHHH-S-HHHHHHH | aaaaxabaaaaaaa |
1l7a_A_224 | 1l7a | A | 228 | 241 | FFRRNGSPETEVQA | HHHHS--HHHHHHH | aaaabapaaaaaaa |
1n81_A_116 | 1n81 | A | 139 | 152 | NVDHAREVKEKKRI | HHHH-SSHHHHHHH | aaaaxaxaaaaaaa |
1o7e_B_24 | 1o7e | B | 26 | 39 | AITAASDFAALEKA | HHHH--SHHHHHHH | aaaaxabaaaaaaa |
1or4_A_130 | 1or4 | A | 148 | 161 | YEASITNQQELLKA | HHHH--SHHHHHHH | aaaabaxaaaaaaa |
1r3c_A_244 | 1r3c | A | 246 | 259 | LLKKISSESARNYI | HHHH---HHHHHHH | aaaaxapaaaaaaa |
1s3e_A_148 | 1s3e | A | 152 | 165 | LDKLCWTESAKQLA | HHHH-SSHHHHHHH | aaaaxabaaaaaaa |
2fok_A_41 | 2fok | A | 42 | 55 | IPTLVKESKIQKEL | HHHH--SHHHHHHH | aaaabapaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0o_A_157 | 1h0o | A | CO1CO BINDING SITE FOR CHAIN A | Q - 166 |
1h0o_A_157 | 1h0o | A | CO1CO BINDING SITE FOR CHAIN A | E - 170 |
1o7e_B_24 | 1o7e | B | AC6SO4 BINDING SITE FOR CHAIN B | D - 24 |
Clusters included in this Subclass |
CLUSTER: HH.2.111 |
CLUSTER: HH.3.52 |