Information on SUBCLASS 3.5.3 |
Subclass Accession number: 2321
Subclass: 3.5.3 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 9.5 +/- 11.5 Average RMSD (Å) : 0.857 +/- 0.230 Consensus geometry
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Consensus Sequence: | pXXXcXX |
(φψ)-conformation: | aabapaa |
Pattern: | [adekr] | [ael] | [AILV] | x | [dekrt] | x | x | [kqrsw] | [DGNT] | x | [agkv] | x | x | [eqs] | x | x |
Conservation: | -0.094 | -0.091 | 2.108 | -0.834 | -0.231 | -0.948 | -0.507 | -0.288 | 2.219 | -1.249 | -0.043 | -0.393 | -0.282 | 1.262 | -0.176 | -0.453 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a28_A_838 | 1a28 | A | 854 | 869 | KAIGLRQKGVVSSSQR | HHHHTT--SHHHHHHH | aaaaaabapaaaaaaa |
1f5m_A_21 | 1f5m | A | 33 | 48 | EGLSDGQVNWVCNLSN | HHHHTT--BHHHHHHH | aaaaaabapaaaaaaa |
1h0o_A_157 | 1h0o | A | 179 | 194 | LLIDTYIKDPKEREYL | HHHHHH---HHHHHHH | aaaaaabaxaaaaaaa |
1o7e_B_24 | 1o7e | B | 24 | 39 | DAAITAASDFAALEKA | HHHHHH--SHHHHHHH | aaaaaaxabaaaaaaa |
1s3e_A_148 | 1s3e | A | 150 | 165 | ELLDKLCWTESAKQLA | HHHHHH-SSHHHHHHH | aaaaaaxabaaaaaaa |
1v9m_A_146 | 1v9m | A | 152 | 167 | RAVLRETQDLARVEAL | HHHHTT---HHHHHHH | aaaaaabaxaaaaaaa |
1vh4_A_382 | 1vh4 | A | 395 | 410 | AELTEALRDEGLKQQV | HHHHTT---HHHHHHH | aaaaaaxaxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | L - 887 |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | Y - 890 |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | C - 891 |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | L - 892 |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | T - 894 |
1a28_A_838 | 1a28 | A | STRPROGESTERONE | F - 895 |
1h0o_A_157 | 1h0o | A | COCOBALT (II) ION | Q - 166 |
1h0o_A_157 | 1h0o | A | COCOBALT (II) ION | E - 170 |
1h0o_A_157 | 1h0o | A | COCOBALT (II) ION | H - 173 |
1s3e_A_148 | 1s3e | A | RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL | F - 168 |
1s3e_A_148 | 1s3e | A | RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL | L - 171 |
1s3e_A_148 | 1s3e | A | RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL | C - 172 |
1s3e_A_148 | 1s3e | A | RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL | V - 173 |
1v9m_A_146 | 1v9m | A | GOLGLYCEROL | P - 146 |
1v9m_A_146 | 1v9m | A | GOLGLYCEROL | R - 149 |
1v9m_A_146 | 1v9m | A | GOLGLYCEROL | D - 175 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0o_A_157 | 1h0o | A | CO1CO BINDING SITE FOR CHAIN A | Q - 166 |
1h0o_A_157 | 1h0o | A | CO1CO BINDING SITE FOR CHAIN A | E - 170 |
1o7e_B_24 | 1o7e | B | AC6SO4 BINDING SITE FOR CHAIN B | D - 24 |
Clusters included in this Subclass |
CLUSTER: HH.4.69 |