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PDB code:

Information on SUBCLASS 3.5.6

Subclass Accession number: 2324 Subclass: 3.5.6 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 5.3 +/- 10.7 Average RMSD (Å) : 1.000 +/- 0.265 Consensus geometry d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aa7_A_90	1aa7	A	92	116	NMDKAVKLYRKLKREITFHGAKEIS	HHHHHHHHHHHHTT--SHHHHHHHH	aaaaaaaaaaaaaaxabaaaaaaaa
1f5m_A_21	1f5m	A	25	49	LEQLLLSYEGLSDGQVNWVCNLSNA	HHHHHHHHHHHHTT--BHHHHHHHH	aaaaaaaaaaaaaabapaaaaaaaa
1o7j_A_300	1o7j	A	300	324	PAHARILLMLALTRTSDPKVIQEYF	HHHHHHHHHHHTTT---HHHHHHHH	aaaaaaaaaaaaaabaxaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1o7j_A_300	1o7j	A	GOLGLYCEROL	R - 304
1o7j_A_300	1o7j	A	GOLGLYCEROL	M - 308
1o7j_A_300	1o7j	A	EDO1,2-ETHANEDIOL	L - 311
1o7j_A_300	1o7j	A	EDO1,2-ETHANEDIOL	S - 315

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1aa7_A_90	1aa7	A	S1RNA-BINDING SITE.	K - 95
1aa7_A_90	1aa7	A	S1RNA-BINDING SITE.	K - 98
1aa7_A_90	1aa7	A	S1RNA-BINDING SITE.	R - 101
1aa7_A_90	1aa7	A	S1RNA-BINDING SITE.	K - 102
1aa7_A_90	1aa7	A	S1RNA-BINDING SITE.	R - 105

Clusters included in this Subclass

CLUSTER: HH.6.164

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