ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.5.8

Subclass Accession number: 2326
Subclass: 3.5.8

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3
GO : GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)
SCOP : 53473 (>75 %)  53474 (>75 %)  53558 (>75 %)

Number of loops: 2

Average sequence ID (%) : 3.7 +/- 0.0
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 90-135

rho (°): 0-45

Consensus Sequence:	pcXhppp
(φψ)-conformation:	aabapaa

Pattern:	[KQ]	[EW]	[KY]	x	[IY]	[AF]	[AF]	[CL]	x	[HR]	[SV]	[I]	[QR]	[EK]	[DN]	[HI]	[GL]	[DE]	[DE]	[EQ]	[TY]	[LV]	[AE]	[KL]	[FL]	[FI]	[AD]
Conservation:	0.705	0.190	-0.324	-1.352	-0.067	-0.838	-0.838	0.448	-1.095	0.962	-1.352	1.733	0.705	0.705	1.219	-0.838	-1.867	1.476	1.476	1.219	-0.324	0.190	-0.581	-1.095	0.190	0.190	-0.838

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j7l_A_217	1j7l	A	217	243	KWYDIAFCVRSIREDIGEEQYVELFFD	HHHHHHHHHHHHHHH-S-THHHHHHHH	aaaaaaaaaaaaaaababaaaaaaaaa
1nq7_A_378	1nq7	A	385	411	QEKIYFALQHVIQKNHLDDETLAKLIA	HHHHHHHHHHHHHHH-S-TTHHHHHHH	aaaaaaaaaaaaaaabaxaaaaaaaaa

Clusters included in this Subclass