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Information on SUBCLASS 4.1.7
Subclass Accession number: 2367
Subclass: 4.1.7 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.2 (>50 %)  4.2.1 (>50 %)  
GO : GO:0016829 (>50 %)  GO:0016835 (>50 %)  GO:0016836 (>50 %)  
 Number of loops: 6

Average sequence ID (%) : 9.6 +/- 11.3
Average RMSD (Å) : 0.417 +/- 0.194

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXhXXX
(φψ)-conformation: aalabpaa
Pattern: [ailp][ART][AEKL]x[filvy][AEKL]x[EGKS]x[ilmv][DPST]xx[aitv][AFGL][ekmq]
Conservation:-0.3751.3290.017-1.6570.167-0.385-0.7911.292-1.5660.9631.197-0.973-0.6790.1000.0831.279
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ezf_A_1771ezf   A184199SRLFSASEFEDPLVGEHHHHHHHTSS-HHHHHaaaaaaavabpaaaaa
1lm5_A_26331lm5   A26332648ITEGIERGIVDSITGQHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1lm5_A_27091lm5   A27092724AAEAVKEKWLPYEAGQHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1p6x_A_1471p6x   A149164PAARYLLGDMSMCALMHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1v74_B_51v74   B924LAKLFLASKITAIEFSHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1vdk_A_431vdk   A5772ARANLELGELPEEIAKHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 177
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID V - 179
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 180
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID I - 181
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 183
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 187
1p6x_A_1471p6x   A     THMTHYMIDINE F - 148
1p6x_A_1471p6x   A     THMTHYMIDINE P - 149
1p6x_A_1471p6x   A     THMTHYMIDINE R - 152

Clusters included in this Subclass
CLUSTER: HH.4.106
CLUSTER: HH.5.77