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Information on SUBCLASS 4.1.9
Subclass Accession number: 2369
Subclass: 4.1.9 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.8 +/- 18.0
Average RMSD (Å) : 0.867 +/- 0.416

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXXpXphX
(φψ)-conformation: aalabpaa
Pattern: [RS]x[FR][HKR]x[AKR][ER][ILT][DH][PVY][HMR][DEQ]x[KL][ENR][ALY][LV][AK]
Conservation:0.154-1.4910.0070.678-1.491-0.1891.284-0.3341.776-1.346-0.4791.256-0.447-0.0910.100-1.2011.2200.593
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j1u_A_2701j1u   A275292SLFKNKELHPMDLKNAVAHHHHTTSS-HHHHHHHHHaaaaavabxaaaaaaaaa
1jj2_M_111jj2   M1128RRRREARTDYHQRLRLLKHHHHTT---HHHHHHHHHaaaaalabxaaaaaaaaa
1thf_D_2251thf   D225242SVFHFREIDVRELKEYLKHHHHTT-S-HHHHHHHHHaaaaalabxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1thf_D_2251thf   D     PO4PHOSPHATE ION S - 225
1thf_D_2251thf   D     PO4PHOSPHATE ION V - 226

Clusters included in this Subclass
CLUSTER: HH.6.144