Information on SUBCLASS 4.4.2 |
Subclass Accession number: 2376
Subclass: 4.4.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0030151 (>50 %) GO:0046914 (>50 %) SCOP : 53705 (>50 %) 53706 (>50 %) 53707 (>50 %) |
Number of loops: 9 Average sequence ID (%) : 11.7 +/- 12.5 Average RMSD (Å) : 0.689 +/- 0.196 Consensus geometry
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Consensus Sequence: | XXGphXXh |
(φψ)-conformation: | aagabpaa |
Pattern: | [ADEKNR] | [AGLM] | [ilvy] | x | x | [gr] | x | [ailvy] | [ADEPQST] | [adegnpqs] | [agipvy] | x | [AILMVY] | x | [ADGRT] |
Conservation: | 0.268 | -0.012 | 0.545 | -0.616 | -0.866 | 2.875 | -0.219 | 0.338 | 0.205 | -0.827 | -0.899 | -0.674 | 0.976 | -1.063 | -0.032 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1brw_A_18 | 1brw | A | 26 | 40 | RGYTNGDIPDYQMSA | HHHHTTSS-HHHHHH | aaaaavabxaaaaaa |
1ek9_A_360 | 1ek9 | A | 360 | 374 | AGYSVGTRTIVDVLD | HHHHTTSS-HHHHHH | aaaaavabbaaaaaa |
1h6k_A_121 | 1h6k | A | 133 | 147 | DLVNCHVIAAPSMVA | HHHHTTSB-HHHHHH | aaaaavabxaaaaaa |
1o17_A_18 | 1o17 | A | 26 | 40 | KAIIRGEVPEILVSA | HHHHTT-S-HHHHHH | aaaaavabpaaaaaa |
1oe0_A_114 | 1oe0 | A | 117 | 131 | NMRRNGSLEQGMYNT | HHHHTTSS-HHHHHH | aaaaavabxaaaaaa |
1rlr_*_102 | 1rlr | - | 108 | 122 | KMVEMGKYDNHLLED | HHHHTTSS-THHHHH | aaaaavabxaaaaaa |
1uou_A_51 | 1uou | A | 59 | 73 | AAVVNGSAQGAQIGA | HHHHHT-S-HHHHHH | aaaaagaxxaaaaaa |
1uw4_B_865 | 1uw4 | B | 877 | 891 | ELYNYRMVESAVIFR | HHHHTTSS-HHHHHH | aaaaavabxaaaaaa |
1v8g_A_15 | 1v8g | A | 23 | 37 | RALMAGEVSPVRAAG | HHHHTT-S-HHHHHH | aaaaavabxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1brw_A_18 | 1brw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | I - 45 |
1brw_A_18 | 1brw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Y - 46 |
1brw_A_18 | 1brw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | F - 47 |
1brw_A_18 | 1brw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 48 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | A - 360 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | G - 361 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | Y - 362 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | S - 363 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | R - 367 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | T - 368 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | V - 370 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | D - 371 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | V - 372 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | D - 374 |
1ek9_A_360 | 1ek9 | A | MSESELENOMETHIONINE | A - 375 |
1oe0_A_114 | 1oe0 | A | TTPTHYMIDINE-5'-TRIPHOSPHATE | F - 114 |
1oe0_A_114 | 1oe0 | A | TTPTHYMIDINE-5'-TRIPHOSPHATE | V - 115 |
1oe0_A_114 | 1oe0 | A | TTPTHYMIDINE-5'-TRIPHOSPHATE | M - 118 |
Clusters included in this Subclass |
CLUSTER: HH.5.30 |