ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.5.5

Subclass Accession number: 2381
Subclass: 4.5.5

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 6.7 +/- 8.4
Average RMSD (Å) : 0.967 +/- 0.252

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	pXhXhXXp
(φψ)-conformation:	aalappaa

Pattern:	[FPT]	[LTY]	x	x	[AKR]	[AFM]	[EHS]	[AN]	[GL]	x	[AL]	[GST]	x	[HK]	[ANQ]	[AIM]	[AQS]	[GIK]	[LTW]	[AKV]	[APY]	x	x	x	x
Conservation:	-0.779	-0.110	-1.449	-0.947	0.894	0.058	1.062	0.861	0.574	-0.779	1.187	0.727	-0.947	2.571	0.058	0.392	0.727	-1.951	0.225	-0.277	-0.445	-1.114	0.685	-0.779	-0.445

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1e3o_C_44	1e3o	C	45	69	TTISRFEALNLSFKNMSKLKPLLEK	HHHHHHHHT-S-HHHHHHHHHHHHH	aaaaaaaalabxaaaaaaaaaaaaa
1hzf_A_1143	1hzf	A	1159	1183	FLGEKASAGLLGAHAAAITAYALTL	HHHHHHHHT---HHHHHHHHHHHHH	aaaaaaaavaxxaaaaaaaaaaaaa
1otv_A_28	1otv	A	28	52	PYHIAMHNGDATRKQIQGWVANRFY	HHHHHHHHT---HHHHHHHHHHHHH	aaaaaaaavaxxaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass