Information on SUBCLASS 4.12.1 |
Subclass Accession number: 2397
Subclass: 4.12.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.6 (>75 %) 2.6.1 (>75 %) 2.6.1.1 SCOP : 53382 (>75 %) 53383 (>75 %) 53384 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 12.8 +/- 14.5 Average RMSD (Å) : 0.650 +/- 0.129 Consensus geometry
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Consensus Sequence: | pXXcXXpc |
(φψ)-conformation: | aaplppaa |
Pattern: | [ILW] | x | [ANR] | [EKQT] | [HLWY] | [AEKR] | [GK] | [KMR] | [ADGS] | [DRSY] | [DEG] | x | [AFL] |
Conservation: | 0.312 | -0.715 | -0.684 | 0.072 | 0.072 | -0.234 | 2.300 | 0.973 | -0.540 | -1.968 | 0.533 | 0.228 | -0.351 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eyq_A_58 | 1eyq | A | 62 | 74 | LAAKWKGKSSEEL | HHHHHTT--HHHH | aaaaaxvxxaaaa |
1h4r_A_181 | 1h4r | A | 191 | 203 | WYAEHRGRARDEA | HHHTTTT--HHHH | aaaaapvxxaaaa |
1i6l_A_253 | 1i6l | A | 256 | 268 | LERQYEGKGYGVF | HHHHTTT--HHHH | aaaaapvxxaaaa |
1nwz_A_11 | 1nwz | A | 11 | 23 | IENTLAKMDDGQL | HHHHTTT--HHHH | aaaaapvxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | R - 286 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | Y - 287 |
1i6l_A_253 | 1i6l | A | GOLGLYCEROL | Y - 287 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | H - 288 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | H - 289 |
Clusters included in this Subclass |
CLUSTER: HH.4.253 |
CLUSTER: HH.5.184 |