Logo
Information on SUBCLASS 4.12.1
Subclass Accession number: 2397
Subclass: 4.12.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.6 (>75 %)  2.6.1 (>75 %)  2.6.1.1
SCOP : 53382 (>75 %)  53383 (>75 %)  53384 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 12.8 +/- 14.5
Average RMSD (Å) : 0.650 +/- 0.129

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXXcXXpc
(φψ)-conformation: aaplppaa
Pattern: [ILW]x[ANR][EKQT][HLWY][AEKR][GK][KMR][ADGS][DRSY][DEG]x[AFL]
Conservation:0.312-0.715-0.6840.0720.072-0.2342.3000.973-0.540-1.9680.5330.228-0.351
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eyq_A_581eyq   A6274LAAKWKGKSSEELHHHHHTT--HHHHaaaaaxvxxaaaa
1h4r_A_1811h4r   A191203WYAEHRGRARDEAHHHTTTT--HHHHaaaaapvxxaaaa
1i6l_A_2531i6l   A256268LERQYEGKGYGVFHHHHTTT--HHHHaaaaapvxxaaaa
1nwz_A_111nwz   A1123IENTLAKMDDGQLHHHHTTT--HHHHaaaaapvxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i6l_A_2531i6l   A     MSESELENOMETHIONINE R - 286
1i6l_A_2531i6l   A     MSESELENOMETHIONINE Y - 287
1i6l_A_2531i6l   A     GOLGLYCEROL Y - 287
1i6l_A_2531i6l   A     MSESELENOMETHIONINE H - 288
1i6l_A_2531i6l   A     MSESELENOMETHIONINE H - 289

Clusters included in this Subclass
CLUSTER: HH.4.253
CLUSTER: HH.5.184