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Information on SUBCLASS 4.18.1
Subclass Accession number: 2406
Subclass: 4.18.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.6 (>75 %)  2.6.1 (>75 %)  2.6.1.12.7.2 (>75 %)  2.7.2.3
GO : GO:0004069 (>75 %)  GO:0004618 (>75 %)  GO:0008483 (>75 %)  GO:0016301 (>75 %)  GO:0016769 (>75 %)  GO:0016774 (>75 %)  
SCOP : 53382 (>75 %)  53383 (>75 %)  53384 (>75 %)  53747 (>50 %)  53748 (>50 %)  53749 (>50 %)  
 Number of loops: 6

Average sequence ID (%) : 7.2 +/- 11.4
Average RMSD (Å) : 1.000 +/- 0.283

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXXpXXXX
(φψ)-conformation: aapbbpaa
Pattern: [kpqrt][ailmv][DHNRT][adnqs]x[EKNT][lmpt][DPST][dekp][AEGR]xx
Conservation:-0.6580.1141.258-0.547-0.5301.493-0.7231.4750.0000.431-1.704-0.610
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aor_A_5451aor   A545556PARDDTLPKRFLHHHHS---HHHHaaaaxbbxaaaa
1hfu_A_4701hfu   A473484TVDANNPPVEWAHHHH----HHHHaaaabbxxaaaa
1i4m_A_1721i4m   A186197QHTVTTTTKGENHHHH----HHHHaaaapxbxaaaa
1iw0_A_1691iw0   A179190KLNNLELSDEQRHHHH----HHHHaaaaxxbxaaaa
1n45_A_1751n45   A185196RMNSLEMTPAVRHHHH----HHHHaaaaxxbxaaaa
2trc_P_742trc   P7990LIHQDKEDEGCLHHHH----HHHHaaaaxbxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i4m_A_1721i4m   A     CDCADMIUM ION N - 173
1i4m_A_1721i4m   A     CDCADMIUM ION H - 177
1i4m_A_1721i4m   A     CDCADMIUM ION N - 181
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 173
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 177
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 200
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 201
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 204
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 205
1iw0_A_1691iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 208
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 179
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 183
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 206
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 207
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 210
1n45_A_1751n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 214
2trc_P_742trc   P     MSESELENOMETHIONINE I - 74
2trc_P_742trc   P     MSESELENOMETHIONINE E - 76
2trc_P_742trc   P     MSESELENOMETHIONINE Y - 77
2trc_P_742trc   P     MSESELENOMETHIONINE I - 80
2trc_P_742trc   P     MSESELENOMETHIONINE Y - 93
2trc_P_742trc   P     MSESELENOMETHIONINE R - 94
2trc_P_742trc   P     MSESELENOMETHIONINE R - 95
2trc_P_742trc   P     MSESELENOMETHIONINE Q - 96

Clusters included in this Subclass
CLUSTER: HH.3.93