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Information on SUBCLASS 4.28.1
Subclass Accession number: 2418
Subclass: 4.28.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.3 (>50 %)  2.3 (>75 %)  2.3.1 (>50 %)  2.3.1 (>75 %)  2.3.1.412.3.1.41
GO : GO:0008415 (>75 %)  GO:0008415 (>75 %)  GO:0016746 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  GO:0016747 (>75 %)  
SCOP : 53900 (>75 %)  53900 (>75 %)  53901 (>75 %)  53901 (>75 %)  53902 (>75 %)  53902 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 55.6 +/- -0.7
Average RMSD (Å) : 0.300 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: ppGNTSXA
(φψ)-conformation: aaepaeaa
Pattern: [ILV][DE][HR][HTY][G][N][T][S][AT][A][S][IV][P][CL][A][LM][ADK][E][AL][LV][DRT]
Conservation:-0.4990.215-0.240-1.0301.4931.4930.8950.298-0.7500.2980.2980.0112.090-0.6570.298-0.178-1.6270.895-1.164-0.579-1.561
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hnj_A_2691hnj   A269289LDRHGNTSAASVPCALDEAVRHHHH-B-GGGHHHHHHHHHHHaaaaexaeaaaaaaaaaaaaa
1hzp_A_2691hzp   A269289IEHTGNTSAASIPLAMAELLTHHHH-B-GGGHHHHHHHHHHHaaaaexaeaaaaaaaaaaaaa
1ub7_A_2711ub7   A271291VDRYGNTSTASIPLALKEAVDHHHH-B-GGGHHHHHHHHHHHaaaaexaeaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hnj_A_2691hnj   A     MLCMALONYL-COENZYME A N - 274
1hzp_A_2691hzp   A     GOLGLYCEROL H - 271
1hzp_A_2691hzp   A     DAOLAURIC ACID N - 274
1hzp_A_2691hzp   A     DAOLAURIC ACID S - 276
1hzp_A_2691hzp   A     GOLGLYCEROL L - 282
1hzp_A_2691hzp   A     GOLGLYCEROL A - 285
1hzp_A_2691hzp   A     GOLGLYCEROL E - 286
1hzp_A_2691hzp   A     GOLGLYCEROL L - 287
1hzp_A_2691hzp   A     GOLGLYCEROL T - 289
1ub7_A_2711ub7   A     CEAS-HYDROXY-CYSTEINE N - 276
1ub7_A_2711ub7   A     CEAS-HYDROXY-CYSTEINE S - 278
1ub7_A_2711ub7   A     CEAS-HYDROXY-CYSTEINE T - 279
1ub7_A_2711ub7   A     CEAS-HYDROXY-CYSTEINE A - 280

Clusters included in this Subclass
CLUSTER: HH.5.240