ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.34.1

Subclass Accession number: 2424
Subclass: 4.34.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.3 (>75 %)  1.3.99 (>75 %)  6.2 (>50 %)  6.2.1 (>50 %)
GO : GO:0003995 (>75 %)  GO:0004774 (>50 %)  GO:0016405 (>50 %)  GO:0016627 (>75 %)  GO:0016874 (>50 %)  GO:0016877 (>50 %)  GO:0016878 (>50 %)
SCOP : 47203 (>75 %)  47204 (>75 %)  47363 (>75 %)  56058 (>50 %)  56059 (>50 %)  56081 (>50 %)

Number of loops: 3

Average sequence ID (%) : 12.9 +/- 12.4
Average RMSD (Å) : 0.700 +/- 0.173

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	XpXPpNXp
(φψ)-conformation:	aabaabaa

Pattern:	x	[EGR]	x	[IL]	[FLY]	[ADG]	[ACV]	[LM]	x	[KL]	x	[CVW]	[KQT]	[HI]	[HK]	[HQW]	[P]	[ENT]	[N]	[LPT]	[KQT]	[HMV]	x	[ACT]	[CER]	[KLV]	[LTV]	[GSV]	[GRS]	[AFL]	[MTV]
Conservation:	-0.732	-0.582	-0.732	0.919	0.397	-0.431	-0.055	0.994	-0.028	-0.028	-0.582	-0.281	-0.205	0.558	0.611	0.021	3.559	-0.130	2.882	-0.732	-0.205	-0.507	-0.958	0.021	-0.808	-0.657	-0.205	-0.883	-0.507	-0.582	-0.130

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1lhp_A_233	1lhp	A	233	263	TGDLFAAMLLAWTHKHPNNLKVACEKTVSAM	HHHHHHHHHHHHHHHSTT-HHHHHHHHHHHH	aaaaaaaaaaaaaaabaabaaaaaaaaaaaa
1osh_A_405	1osh	A	412	442	QEPLLDVLQKLCKIHQPENPQHFACLLGRLT	HHHHHHHHHHHHHHH-TT-TTHHHHHHHHHH	aaaaaaaaaaaaaaabaabaaaaaaaaaaaa
1wer_*_868	1wer	-	870	900	LRYIYGCLQKSVQHKWPTNTTMRTRVVSGFV	HHHHHHHHHHHHHHHSTT-SSHHHHHHHHHH	aaaaaaaaaaaaaaabaaxaaaaaaaaaaaa

Clusters included in this Subclass