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Information on SUBCLASS 4.38.1
Subclass Accession number: 2428
Subclass: 4.38.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.3 (>75 %)  2.3.1 (>75 %)  2.3.1.412.4 (>50 %)  2.4.1 (>50 %)  2.4.1.1
GO : GO:0008415 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  
SCOP : 53755 (>50 %)  53756 (>50 %)  53766 (>50 %)  53900 (>75 %)  53901 (>75 %)  53902 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 5.3 +/- 5.8
Average RMSD (Å) : 0.967 +/- 0.379

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXhXcXX
(φψ)-conformation: aalpplaa
Pattern: [ILP][LY]xx[AM][AIL][AER]x[AGQ][CIY][DEG][DGN][KMR]x[DET]x[EL]x[KRT]
Conservation:-0.5471.434-1.043-1.5381.5980.278-0.052-1.208-0.2170.2780.7741.2690.774-1.0430.939-1.043-0.219-1.2080.774
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l5j_A_6131l5j   A626644LLKWMIAEGYGDRRTLERRHHHHHHHTT-S-HHHHHHHaaaaaaaavxpvaaaaaaa
1ld8_A_3091ld8   A318336IYEDMLENQCDNKEDILNKHHHHHHHTT-SSHHHHHHHaaaaaaaalxxlaaaaaaa
1ot8_A_1211ot8   A121139PLILAARLAIEGMVEDLITHHHHHHHTT-TTHHHHHHHaaaaaaaalxxgaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ot8_A_1211ot8   A     MGMAGNESIUM ION G - 132
1ot8_A_1211ot8   A     MGMAGNESIUM ION E - 135
1ot8_A_1211ot8   A     MGMAGNESIUM ION D - 136

Clusters included in this Subclass
CLUSTER: HH.4.177