Information on SUBCLASS 4.38.1 |
Subclass Accession number: 2428
Subclass: 4.38.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.3 (>75 %) 2.3.1 (>75 %) 2.3.1.412.4 (>50 %) 2.4.1 (>50 %) 2.4.1.1 GO : GO:0008415 (>75 %) GO:0016746 (>75 %) GO:0016747 (>75 %) SCOP : 53755 (>50 %) 53756 (>50 %) 53766 (>50 %) 53900 (>75 %) 53901 (>75 %) 53902 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 5.3 +/- 5.8 Average RMSD (Å) : 0.967 +/- 0.379 Consensus geometry
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Consensus Sequence: | XXXhXcXX |
(φψ)-conformation: | aalpplaa |
Pattern: | [ILP] | [LY] | x | x | [AM] | [AIL] | [AER] | x | [AGQ] | [CIY] | [DEG] | [DGN] | [KMR] | x | [DET] | x | [EL] | x | [KRT] |
Conservation: | -0.547 | 1.434 | -1.043 | -1.538 | 1.598 | 0.278 | -0.052 | -1.208 | -0.217 | 0.278 | 0.774 | 1.269 | 0.774 | -1.043 | 0.939 | -1.043 | -0.219 | -1.208 | 0.774 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1l5j_A_613 | 1l5j | A | 626 | 644 | LLKWMIAEGYGDRRTLERR | HHHHHHHTT-S-HHHHHHH | aaaaaaaavxpvaaaaaaa |
1ld8_A_309 | 1ld8 | A | 318 | 336 | IYEDMLENQCDNKEDILNK | HHHHHHHTT-SSHHHHHHH | aaaaaaaalxxlaaaaaaa |
1ot8_A_121 | 1ot8 | A | 121 | 139 | PLILAARLAIEGMVEDLIT | HHHHHHHTT-TTHHHHHHH | aaaaaaaalxxgaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ot8_A_121 | 1ot8 | A | MGMAGNESIUM ION | G - 132 |
1ot8_A_121 | 1ot8 | A | MGMAGNESIUM ION | E - 135 |
1ot8_A_121 | 1ot8 | A | MGMAGNESIUM ION | D - 136 |
Clusters included in this Subclass |
CLUSTER: HH.4.177 |