Information on SUBCLASS 5.4.2 |
Subclass Accession number: 2446
Subclass: 5.4.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48370 (>75 %) 51569 (>75 %) 51570 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 13.3 +/- 14.1 Average RMSD (Å) : 1.000 +/- 0.395 Consensus geometry
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Consensus Sequence: | XppXpIpXX |
(φψ)-conformation: | aapaappaa |
Pattern: | [CILW] | x | [PQST] | [cily] | [fltv] | [dkns] | [DEKNS] | x | [DKNQT] | [IV] | [DNST] | [aikv] | [eqwy] | [DEKQ] | [KL] | [afiv] | [dkpqr] | [gily] | [ILM] | x | [eknt] | [afly] |
Conservation: | 0.178 | -0.641 | 0.127 | -0.708 | -0.822 | -0.345 | 0.646 | -0.392 | -0.028 | 2.893 | 0.918 | -0.660 | -0.519 | 1.185 | 0.531 | -0.698 | -0.700 | -1.198 | 1.922 | -0.664 | -0.498 | -0.526 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1epu_A_388 | 1epu | A | 388 | 409 | IVPILLDQKISAYDKIRIILLY | HHHHHT-TTS-HHHHHHHHHHH | aaaaaabaaxxaaaaaaaaaaa |
1ezf_A_64 | 1ezf | A | 79 | 100 | LDTLEDDMTISVEKKVPLLHNF | HHHHHH-TTS-HHHHHHHHHHH | aaaaaaxaaxxaaaaaaaaaaa |
1hf8_A_39 | 1hf8 | A | 45 | 66 | LIQCTNEMNVNIPQLADSLFER | HHHHHT-TTS-HHHHHHHHHHH | aaaaaaxaaxxaaaaaaaaaaa |
1klx_A_29 | 1klx | A | 30 | 51 | CLSLVSNSQINKQKLFQYLSKA | HHHHHT-TTS-HHHHHHHHHHH | aaaaaaxaabxaaaaaaaaaaa |
1n5d_A_151 | 1n5d | A | 153 | 174 | LQQKFKSETITEEELVGLMNKF | HHHHHS-SS--HHHHHHHHHHH | aaaaaapaapbaaaaaaaaaaa |
1v54_E_8 | 1v54 | E | 15 | 36 | WVTYFNKPDIDAWELRKGMNTL | HHHHHT-TT--HHHHHHHHHHH | aaaaaapaapxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.51 |