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Information on SUBCLASS 5.12.1
Subclass Accession number: 2458
Subclass: 5.12.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  1.3.99 (>75 %)  1.3.99.13.5 (>50 %)  3.5.2 (>50 %)  3.5.2.6
GO : GO:0008800 (>75 %)  GO:0016810 (>75 %)  GO:0016812 (>75 %)  
SCOP : 51904 (>75 %)  51905 (>75 %)  51934 (>75 %)  53382 (>75 %)  53383 (>75 %)  53402 (>75 %)  56600 (>75 %)  56601 (>75 %)  56602 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 13.6 +/- 17.9
Average RMSD (Å) : 1.200 +/- 0.577

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: ppchhhchX
(φψ)-conformation: aalapppaa
Pattern: [AFPW]xxx[ENRS]x[GK]xx[GLP][ADGN][APVY]xx[CSY][QSWY]x[CIL]xx[GKR][AIL]
Conservation:-1.052-0.443-0.531-0.2270.515-0.4432.4700.118-1.574-0.461-0.007-0.878-0.295-0.1570.1410.080-1.7671.453-0.1111.6460.5690.954
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cs1_A_2161cs1   A224245WWANNIGVTGGAFDSYLLLRGLHHHHHHT-B--HHHHHHHHHHHaaaaaavaxxxaaaaaaaaaaa
1ibj_A_2961ibj   A304325FLQNSEGSGLAPFDCWLCLRGIHHHHHTT-B--HHHHHHHHHHHaaaaaalaxpxaaaaaaaaaaa
1k3p_A_3501k3p   A350371PYFIEKKLYPNVDFYSGIILKAHHHHHTT--B-HHHHHHHHHHHaaaaaalaxwbaaaaaaaaaaa
1ofn_A_1761ofn   A177198AEAQRQGLLPDYTTSQEIERRLHHHHHTT-S-BHHHHHHHHHHHaaaaaavaxxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cs1_A_2161cs1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 230
1ibj_A_2961ibj   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 310
1k3p_A_3501k3p   A     SULSULFATE ANION V - 361
1k3p_A_3501k3p   A     SULSULFATE ANION D - 362

Clusters included in this Subclass
CLUSTER: HH.5.82