Information on SUBCLASS 5.13.1 |
Subclass Accession number: 2459
Subclass: 5.13.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.1 (>75 %) 2.7.1.374.2 (>75 %) 4.2.1 (>75 %) 4.2.1.40 GO : GO:0004672 (>75 %) GO:0005524 (>75 %) GO:0008872 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016773 (>75 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0016836 (>75 %) GO:0030554 (>75 %) SCOP : 51604 (>75 %) 51609 (>75 %) 56111 (>75 %) 56112 (>75 %) 88854 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 7.4 +/- 7.8 Average RMSD (Å) : 1.000 +/- 0.361 Consensus geometry
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Consensus Sequence: | XXppXXXXc |
(φψ)-conformation: | aallappaa |
Pattern: | [GIV] | x | [ADE] | [AFL] | x | x | x | [GT] | [DR] | [DHQ] | [AQT] | x | [DPT] | x | [GK] | x | [AV] | [LTV] | x | [LMY] | [AEG] | x | x | x | [AL] | [ADK] | [GLV] |
Conservation: | -0.692 | 0.154 | 0.492 | -0.354 | -0.354 | -0.692 | -2.214 | 1.320 | 1.320 | 1.169 | -0.015 | -0.861 | 0.323 | -1.199 | 1.320 | 0.661 | 1.664 | 0.492 | -1.199 | 0.999 | -0.184 | -0.861 | 0.477 | -0.861 | 0.985 | -0.523 | -1.368 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1qo8_A_184 | 1qo8 | A | 188 | 214 | IEDAMKGGRQQNDIKLVTILAEQSADG | HHHHHHHTTT-S-HHHHHHHHHHHHHH | aaaaaaaalvaxxaaaaaaaaaaaaaa |
1ujn_A_231 | 1ujn | A | 234 | 260 | GHALEAQTRHALPHGMAVAYGLLYAAL | HHHHHHHTTT-S-HHHHHHHHHHHHHH | aaaaaaaavvaxwaaaaaaaaaaaaaa |
1vin_*_275 | 1vin | - | 275 | 301 | VAEFVYITDDTYTKKQVLRMEHLVLKV | HHHHHHHTTTSS-HHHHHHHHHHHHHH | aaaaaaaallabxaaaaaaaaaaaaaa |
Clusters included in this Subclass |
CLUSTER: HH.5.254 |