Information on SUBCLASS 5.18.1 |
Subclass Accession number: 2465
Subclass: 5.18.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>50 %) 3.1.1 (>50 %) 3.1.1.4 GO : GO:0003700 (>75 %) GO:0005509 (>50 %) GO:0016298 (>50 %) GO:0016788 (>50 %) GO:0016789 (>50 %) SCOP : 46688 (>50 %) 46688 (>75 %) 46689 (>75 %) 46690 (>75 %) 48618 (>50 %) 48619 (>50 %) 48623 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 25.5 +/- 19.6 Average RMSD (Å) : 0.500 +/- 0.071 Consensus geometry
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Consensus Sequence: | Xpcpphppp |
(φψ)-conformation: | aababppaa |
Pattern: | [akst] | [EHNQS] | [aq] | x | x | [efr] | [L] | [EK] | [EKR] | [aes] | [F] | x | [EFR] | [KNT] | [MQR] | [KSY] | [LP] | [DNT] | x | [DEKRY] | [DERT] | [kr] | [EQTY] | [eq] | [ILV] | [AS] | [EKQRS] | x | [CLT] |
Conservation: | -0.659 | -0.142 | -0.606 | -0.672 | -1.016 | -1.039 | 1.866 | 1.503 | 0.755 | -0.694 | 3.387 | -1.085 | -0.574 | 0.493 | 0.498 | -0.049 | -0.322 | 0.315 | -1.040 | -0.751 | -0.483 | -0.162 | -0.473 | -0.026 | 0.782 | 1.023 | -0.081 | -0.568 | -0.178 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1akh_A_79 | 1akh | A | 79 | 107 | PQARAFLEEVFRRKQSLNSKEKEEVAKKC | HHHHHHHHHHHHH-SS--HHHHHHHHHHH | aaaaaaaaaaaaababbxaaaaaaaaaaa |
1e3o_C_110 | 1e3o | C | 110 | 138 | TNIRVALEKSFMENQKPTSEDITLIAEQL | HHHHHHHHHHHHH-SS--HHHHHHHHHHH | aaaaaaaaaaaaababxxaaaaaaaaaaa |
1fjl_A_10 | 1fjl | A | 10 | 38 | ASQLDELERAFERTQYPDIYTREELAQRT | HHHHHHHHHHHHH-SS--HHHHHHHHHHH | aaaaaaaaaaaaababpxaaaaaaaaaaa |
1p7i_A_10 | 1p7i | A | 10 | 38 | SEQLARLKREFNENRYLTERRRQQLSSEL | HHHHHHHHHHHHH-SS--HHHHHHHHHHH | aaaaaaaaaaaaababxbaaaaaaaaaaa |
1puf_A_214 | 1puf | A | 214 | 242 | KHQTLELEKEFLFNMYLTRDRRYEVARLL | HHHHHHHHHHHHH-SS--HHHHHHHHHHH | aaaaaaaaaaaaababxbaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p7i_A_10 | 1p7i | A | NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | Y - 25 |
Clusters included in this Subclass |
CLUSTER: HH.4.86 |