|
|
|
|
|
|
|
| Information on SUBCLASS 5.24.1 |
|
Subclass Accession number: 2471
Subclass: 5.24.1 
Type: HH alpha-alpha DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
Conserved Annotation SCOP : 46688 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 9.3 +/- 12.7 Average RMSD (Å) : 0.833 +/- 0.153 Consensus geometry
|
| Consensus Sequence: | hXcXXXpcX |
| (φψ)-conformation: | aalbpbpaa |
| Pattern: | [LT] | [ILV] | [GIP] | [ALT] | x | [FKL] | x | x | x | x | [AF] | x | [GN] | [EKL] | x | [HLV] | [KS] | [DG] | x | x | [IL] | [AGK] | [EK] | [KLT] | [AGL] |
| Conservation: | 0.914 | 1.313 | -1.217 | -0.205 | -0.914 | -0.610 | -0.812 | -0.408 | -0.306 | -1.217 | 0.260 | -0.610 | 1.856 | -0.509 | -0.914 | -0.509 | 1.318 | 1.440 | -0.408 | -0.509 | 1.697 | -0.205 | 1.776 | -0.509 | -0.711 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1bia_*_5 | 1bia | - | 5 | 29 | TVPLKLIALLANGEFHSGEQLGETL | HHHHHHHHHHTTSS-B-HHHHHHHH | aaaaaaaaaaaavxxbxaaaaaaaa |
| 1hlv_A_75 | 1hlv | A | 80 | 104 | LLIAWFQQIRAAGLPVKGIILKEKA | HHHHHHHHHGGGT----HHHHHHHH | aaaaaaaaaaaavbxbpaaaaaaaa |
| 1kkh_A_116 | 1kkh | A | 121 | 145 | TIGTIKAVSGFYNKELKDDEIAKLG | HHHHHHHHHHTTT----HHHHHHHH | aaaaaaaaaaaalbxxxaaaaaaaa |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1kkh_A_116 | 1kkh | A | DIO1,4-DIETHYLENE DIOXIDE | S - 116 |
| 1kkh_A_116 | 1kkh | A | DIO1,4-DIETHYLENE DIOXIDE | S - 117 |
| 1kkh_A_116 | 1kkh | A | DIO1,4-DIETHYLENE DIOXIDE | A - 118 |
| Clusters included in this Subclass |
| CLUSTER: HH.8.20 |
| For any comment or web-related incidence, send an email to the webmaster. |
|