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Information on SUBCLASS 5.25.1
Subclass Accession number: 2472
Subclass: 5.25.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004175 (>50 %)  GO:0004177 (>75 %)  GO:0008233 (>50 %)  GO:0008233 (>75 %)  GO:0008238 (>75 %)  
SCOP : 53473 (>75 %)  53474 (>75 %)  69581 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 4.2 +/- 6.2
Average RMSD (Å) : 0.767 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XphXXhXXX
(φψ)-conformation: aapaabpaa
Pattern: xx[QW]x[LV]x[DHR][AFL][AST][DSW][MV][DPS][AEK][EPS]xx[AKV][DHR]x[AEL]x[HKQ][ALV]x
Conservation:-0.480-0.3613.407-0.4801.433-1.1970.117-0.4800.595-0.6001.5450.117-0.003-0.003-0.480-0.480-0.6000.117-1.078-1.078-0.2410.714-0.003-0.480
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dmt_A_4351dmt   A450473FIQTLDDLTWMDAETKKRAEEKALHHHHHHH-TTS-HHHHHHHHHHHHaaaaaaaxaabxaaaaaaaaaaaa
1eyv_A_871eyv   A96119SVWELLHAADVPEPVVVDEAVQLAHHHHHHH-TTS-HHHHHHHHHHHHaaaaaaabaaxwaaaaaaaaaaaa
1fl1_A_1541fl1   A154177AEWVVSRFSSVSKSERAHILQHVSHHHHHHTBTTS-HHHHHHHHHHHHaaaaaaaxaabxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eyv_A_871eyv   A     PO4PHOSPHATE ION E - 99
1eyv_A_871eyv   A     PO4PHOSPHATE ION D - 105
1eyv_A_871eyv   A     PO4PHOSPHATE ION V - 106
1eyv_A_871eyv   A     PO4PHOSPHATE ION V - 110
1eyv_A_871eyv   A     PO4PHOSPHATE ION E - 114

Clusters included in this Subclass
CLUSTER: HH.6.92