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Information on SUBCLASS 5.29.1
Subclass Accession number: 2476
Subclass: 5.29.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 16.7 +/- 14.4
Average RMSD (Å) : 1.333 +/- 0.306

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXGXXXpXE
(φψ)-conformation: aalbppbaa
Pattern: [GK][QRY]x[AQT][AS]x[G][ATV][EP][ADN][DKT]x[E][NRW]xx[AEF]xxx
Conservation:0.248-0.069-0.433-0.2870.714-0.7232.909-0.0690.627-0.287-0.287-0.5052.255-0.433-0.941-0.189-0.796-0.941-0.7960.003
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ado_A_361ado   A4160KRLQSIGTENTEENRRFYRQHHHHHTT----HHHHHHHHHaaaaaalbxxbaaaaaaaaa
1dw0_A_51dw0   A1130GYEAAAGAPADAERGRALFLHHHHHHTS---HHHHHHHHHaaaaaavbwxbaaaaaaaaa
1qo8_A_1731qo8   A173192KQQTAHGVEDKVEWFIEDAMHHHHHTT----HHHHHHHHHaaaaaavxxbbaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ado_A_361ado   A     13P1,3-DIHYDROXYACETONEPHOSPHATE R - 42
1dw0_A_51dw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 29

Clusters included in this Subclass
CLUSTER: HH.5.78