Information on SUBCLASS 5.29.1 |
Subclass Accession number: 2476
Subclass: 5.29.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 14.4 Average RMSD (Å) : 1.333 +/- 0.306 Consensus geometry
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Consensus Sequence: | XXGXXXpXE |
(φψ)-conformation: | aalbppbaa |
Pattern: | [GK] | [QRY] | x | [AQT] | [AS] | x | [G] | [ATV] | [EP] | [ADN] | [DKT] | x | [E] | [NRW] | x | x | [AEF] | x | x | x |
Conservation: | 0.248 | -0.069 | -0.433 | -0.287 | 0.714 | -0.723 | 2.909 | -0.069 | 0.627 | -0.287 | -0.287 | -0.505 | 2.255 | -0.433 | -0.941 | -0.189 | -0.796 | -0.941 | -0.796 | 0.003 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ado_A_36 | 1ado | A | 41 | 60 | KRLQSIGTENTEENRRFYRQ | HHHHHTT----HHHHHHHHH | aaaaaalbxxbaaaaaaaaa |
1dw0_A_5 | 1dw0 | A | 11 | 30 | GYEAAAGAPADAERGRALFL | HHHHHHTS---HHHHHHHHH | aaaaaavbwxbaaaaaaaaa |
1qo8_A_173 | 1qo8 | A | 173 | 192 | KQQTAHGVEDKVEWFIEDAM | HHHHHTT----HHHHHHHHH | aaaaaavxxbbaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ado_A_36 | 1ado | A | 13P1,3-DIHYDROXYACETONEPHOSPHATE | R - 42 |
1dw0_A_5 | 1dw0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 29 |
Clusters included in this Subclass |
CLUSTER: HH.5.78 |