Logo
Information on SUBCLASS 5.32.1
Subclass Accession number: 2479
Subclass: 5.32.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>50 %)  
Number of loops: 3

Average sequence ID (%) : 3.7 +/- 7.5
Average RMSD (Å) : 0.933 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXhXchppp
(φψ)-conformation: aapplppaa
Pattern: xx[AQ]xx[ART][AFL]x[ARS][AFV][APQ][DG][GLP][HQS][KST][KRS][ITW][CQT]x[NRT]xx[CKL]xx[ILT]x
Conservation:-1.191-1.3461.711-0.570-0.7250.206-0.1040.4760.362-0.1040.2062.643-1.5020.9830.8271.138-0.1040.051-0.8810.8270.051-1.812-0.415-0.104-0.4150.672-0.881
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hh8_A_221hh8   A2349KGALDAFSAVQDPHSRICFNIGCMYTIHHHHHHHHTSSS--HHHHHHHHHHHHHaaaaaaaaaxxlxbaaaaaaaaaaaaa
1m2t_A_1321m2t   A135161LIQSVTALRFPGGQTKTQARSILILIQHHHHHHHHHSTT--HHHHHHHHHHHHHaaaaaaaaabpgpxaaaaaaaaaaaaa
1o65_A_1951o65   A195221DDQYHRLLSAAGLSKSWTRTMQKRRLSHHHHHHHHTSTT--HHHHHHHHHHHHHaaaaaaaaaxpvpxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hh8_A_221hh8   A     FLCCITRATE ANION V - 32
1hh8_A_221hh8   A     FLCCITRATE ANION Q - 33
1hh8_A_221hh8   A     FLCCITRATE ANION D - 34
1hh8_A_221hh8   A     FLCCITRATE ANION P - 35
1hh8_A_221hh8   A     FLCCITRATE ANION H - 36
1hh8_A_221hh8   A     FLCCITRATE ANION S - 37
1hh8_A_221hh8   A     FLCCITRATE ANION R - 38
1hh8_A_221hh8   A     FLCCITRATE ANION I - 39
1hh8_A_221hh8   A     FLCCITRATE ANION C - 40
1m2t_A_1321m2t   A     GOLGLYCEROL R - 143
1m2t_A_1321m2t   A     GOLGLYCEROL F - 144
1m2t_A_1321m2t   A     GOLGLYCEROL G - 147
1m2t_A_1321m2t   A     GOLGLYCEROL Q - 148
1m2t_A_1321m2t   A     GOLGLYCEROL T - 149
1m2t_A_1321m2t   A     GOLGLYCEROL K - 150
1m2t_A_1321m2t   A     GOLGLYCEROL T - 151
1m2t_A_1321m2t   A     ADEADENINE I - 156
1m2t_A_1321m2t   A     ADEADENINE I - 160
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hh8_A_221hh8   A FLCFLC BINDING SITE FOR CHAIN AH - 36
1hh8_A_221hh8   A FLCFLC BINDING SITE FOR CHAIN AR - 38
1hh8_A_221hh8   A FLCFLC BINDING SITE FOR CHAIN AI - 39

Clusters included in this Subclass
CLUSTER: HH.5.230