Information on SUBCLASS 5.32.1 |
Subclass Accession number: 2479
Subclass: 5.32.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) |
Number of loops: 3 Average sequence ID (%) : 3.7 +/- 7.5 Average RMSD (Å) : 0.933 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXhXchppp |
(φψ)-conformation: | aapplppaa |
Pattern: | x | x | [AQ] | x | x | [ART] | [AFL] | x | [ARS] | [AFV] | [APQ] | [DG] | [GLP] | [HQS] | [KST] | [KRS] | [ITW] | [CQT] | x | [NRT] | x | x | [CKL] | x | x | [ILT] | x |
Conservation: | -1.191 | -1.346 | 1.711 | -0.570 | -0.725 | 0.206 | -0.104 | 0.476 | 0.362 | -0.104 | 0.206 | 2.643 | -1.502 | 0.983 | 0.827 | 1.138 | -0.104 | 0.051 | -0.881 | 0.827 | 0.051 | -1.812 | -0.415 | -0.104 | -0.415 | 0.672 | -0.881 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hh8_A_22 | 1hh8 | A | 23 | 49 | KGALDAFSAVQDPHSRICFNIGCMYTI | HHHHHHHHTSSS--HHHHHHHHHHHHH | aaaaaaaaaxxlxbaaaaaaaaaaaaa |
1m2t_A_132 | 1m2t | A | 135 | 161 | LIQSVTALRFPGGQTKTQARSILILIQ | HHHHHHHHHSTT--HHHHHHHHHHHHH | aaaaaaaaabpgpxaaaaaaaaaaaaa |
1o65_A_195 | 1o65 | A | 195 | 221 | DDQYHRLLSAAGLSKSWTRTMQKRRLS | HHHHHHHHTSTT--HHHHHHHHHHHHH | aaaaaaaaaxpvpxaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | V - 32 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | Q - 33 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | D - 34 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | P - 35 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | H - 36 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | S - 37 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | R - 38 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | I - 39 |
1hh8_A_22 | 1hh8 | A | FLCCITRATE ANION | C - 40 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | R - 143 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | F - 144 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | G - 147 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | Q - 148 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | T - 149 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | K - 150 |
1m2t_A_132 | 1m2t | A | GOLGLYCEROL | T - 151 |
1m2t_A_132 | 1m2t | A | ADEADENINE | I - 156 |
1m2t_A_132 | 1m2t | A | ADEADENINE | I - 160 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hh8_A_22 | 1hh8 | A | FLCFLC BINDING SITE FOR CHAIN A | H - 36 |
1hh8_A_22 | 1hh8 | A | FLCFLC BINDING SITE FOR CHAIN A | R - 38 |
1hh8_A_22 | 1hh8 | A | FLCFLC BINDING SITE FOR CHAIN A | I - 39 |
Clusters included in this Subclass |
CLUSTER: HH.5.230 |