ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.1.2

Subclass Accession number: 2485
Subclass: 6.1.2

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.4 (>75 %)  3.4 (>75 %)  3.4.11 (>75 %)  3.4.11.18 3.4.24 (>75 %)
GO : GO:0004175 (>75 %)  GO:0004177 (>75 %)  GO:0004222 (>75 %)  GO:0005509 (>50 %)  GO:0005515 (>75 %)  GO:0008092 (>75 %)  GO:0008233 (>75 %)  GO:0008233 (>75 %)  GO:0008235 (>75 %)  GO:0008237 (>75 %)  GO:0008237 (>75 %)  GO:0008238 (>75 %)  GO:0008270 (>75 %)
SCOP : 47026 (>75 %)  47031 (>75 %)  47032 (>75 %)  55485 (>75 %)  55486 (>75 %)  55490 (>75 %)  55919 (>75 %)  55920 (>75 %)  55921 (>75 %)

Number of loops: 4

Average sequence ID (%) : 24.8 +/- 20.5
Average RMSD (Å) : 0.575 +/- 0.150

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	phhXXXhXXp
(φψ)-conformation:	aapbpgppaa

Pattern:	[EHK]	[AGL]	[ACGM]	[ER]	[AI]	[A]	[DK]	x	[AGV]	x	x	[AK]	[AV]	[IV]	[EKS]	x	[AIL]	[GRT]	[ADEP]	[GQ]	[KMV]	x	x	x	[E]	[LV]	[AG]	[AEKL]	x	[AIV]	[ET]	[KNQY]	[AELM]	[IM]	x
Conservation:	0.372	-0.656	-0.847	1.091	0.326	1.993	0.586	-0.627	-0.307	-1.608	-1.050	0.409	0.623	1.650	0.351	-0.999	-0.261	-0.599	-0.543	0.801	-0.252	-1.303	-0.889	-0.898	2.804	0.777	0.795	-1.050	-0.593	0.301	0.749	-0.492	-0.948	0.990	-0.695

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1chm_A_161	1chm	A	169	203	HGARIADIGGAAVVEALGDQVPEYEVALHATQAMV	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbxvxxaaaaaaaaaaaaa
1pv9_A_127	1pv9	A	135	169	KACEIADKAVMAAIEEITEGKREREVAAKVEYLMK	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbxvxxaaaaaaaaaaaaa
1xgs_A_106	1xgs	A	106	140	ELMEAAKEALNAAISVARAGVEIKELGKAIENEIR	HHHHHHHHHHHHHHHH-STT-BTHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbxgxxaaaaaaaaaaaaa
1xgs_A_3	1xgs	A	8	42	KAGEIAKKVREKAIKLARPGMLLLELAESIEKMIM	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbpvxxaaaaaaaaaaaaa

Clusters included in this Subclass