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Information on SUBCLASS 6.17.1
Subclass Accession number: 2503
Subclass: 6.17.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.182.8 (>75 %)  2.8.4 (>75 %)  2.8.4.13 (>50 %)  
GO : GO:0004364 (>75 %)  GO:0016151 (>75 %)  GO:0016765 (>75 %)  GO:0016782 (>75 %)  GO:0050497 (>75 %)  GO:0050524 (>75 %)  
SCOP : 47615 (>75 %)  47616 (>75 %)  47617 (>75 %)  54861 (>75 %)  55088 (>75 %)  55094 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 4.8 +/- 6.6
Average RMSD (Å) : 1.633 +/- 0.404

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXXhhXXphX
(φψ)-conformation: aabaaaapaa
Pattern: x[GLT][AST]xxxx[LV][ALT][KLM][AKL][AMV]xx[GLP][AIY]x[FKR][RT][IP]x[GSV][EFH][AEL]x[GL]xx
Conservation:-0.444-1.1271.607-0.1020.2400.240-0.2732.7950.2400.752-0.4440.923-1.298-0.956-1.469-0.102-0.6150.0692.2750.571-0.444-0.6150.582-0.786-0.786-0.2890.069-0.615
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i5p_A_531i5p   A5481VGTVSSFLLKKVGSLIGKRILSELWGIIHHHHHHHHHHHHTSTT----HHHHHHHHaaaaaaaaaaaaabaaaabaaaaaaaaa
1ird_A_961ird   A100127LLSHCLLVTLAAHLPAEFTPAVHASLDKHHHHHHHHHHHHH-TTT--HHHHHHHHHaaaaaaaaaaaaabaaaaxaaaaaaaaa
1lw3_A_4231lw3   A423450RTAQLTSLAMLMLDGYYRTIRGFEVLVEHHHHHHHHHHHHH-GGGGSHHHHHHHHHaaaaaaaaaaaaabaaaaxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 97
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 98
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 101
1ird_A_961ird   A     CMOCARBON MONOXIDE L - 101
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 102
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 105
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 129
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 132
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 133
1ird_A_961ird   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 136
1lw3_A_4231lw3   A     PO4PHOSPHATE ION R - 423
1lw3_A_4231lw3   A     PO4PHOSPHATE ION T - 424
1lw3_A_4231lw3   A     PO4PHOSPHATE ION A - 425

Clusters included in this Subclass
CLUSTER: HH.7.87