ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.22.1

Subclass Accession number: 2508
Subclass: 6.22.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.14 (>50 %)  1.14.13 (>50 %)  1.14.13.39 3.1 (>75 %)  3.1.1 (>75 %)  5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.5
GO : GO:0000287 (>75 %)  GO:0004091 (>75 %)  GO:0004497 (>75 %)  GO:0004517 (>75 %)  GO:0004518 (>75 %)  GO:0004519 (>75 %)  GO:0005489 (>50 %)  GO:0005515 (>50 %)  GO:0005516 (>50 %)  GO:0009045 (>75 %)  GO:0010181 (>50 %)  GO:0016705 (>75 %)  GO:0016709 (>75 %)  GO:0016788 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  GO:0048037 (>50 %)  GO:0050662 (>50 %)
SCOP : 51350 (>75 %)  51658 (>75 %)  51665 (>75 %)  53473 (>75 %)  53474 (>75 %)  53475 (>75 %)  56511 (>75 %)  56512 (>75 %)  56513 (>75 %)

Number of loops: 3

Average sequence ID (%) : 22.2 +/- 17.1
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	phcCXXpppX
(φψ)-conformation:	aalbpaabaa

Pattern:	x	x	x	[A]	x	[EQR]	[IL]	[AG]	x	[KNT]	[ALV]	[GN]	[C]	[KNP]	[LTV]	[DNT]	[DST]	[DST]	[AES]	x	[LM]	[AIV]	x	[C]	[L]	[KR]	x
Conservation:	-0.604	-1.109	-0.806	0.709	-0.705	-0.048	0.288	-0.012	-1.008	-0.402	-0.503	0.354	2.982	-0.503	-0.452	-0.250	-0.351	-0.351	-0.452	-0.705	0.471	-0.301	0.331	2.982	0.709	0.539	-0.806

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ea5_A_238	1ea5	A	242	268	RRRAVELGRNLNCNLNSDEELIHCLRE	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaalxxaabaaaaaaaaaa
1mx1_A_1262	1mx1	A	1262	1288	KPLAEQIAITAGCKTTTSAVMVHCLRQ	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaavbxaabaaaaaaaaaa
2bce_*_233	2bce	-	234	260	LFWAKRIAEKVGCPVDDTSKMAGCLKI	HHHHHHHHHHHT---SSHHHHHHHHHH	aaaaaaaaaaavbwaabaaaaaaaaaa

Clusters included in this Subclass