Information on SUBCLASS 6.23.1 |
Subclass Accession number: 2509
Subclass: 6.23.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>50 %) 2.7.1 (>50 %) 3.4 (>75 %) 3.4.21 (>75 %) 3.4.21.62 GO : GO:0004175 (>50 %) GO:0004252 (>50 %) GO:0005509 (>50 %) GO:0005509 (>75 %) GO:0008233 (>50 %) GO:0008236 (>50 %) GO:0016301 (>50 %) GO:0016772 (>50 %) GO:0016773 (>50 %) SCOP : 47472 (>75 %) 47473 (>75 %) 47492 (>75 %) 52742 (>75 %) 52743 (>75 %) 52744 (>75 %) 53612 (>50 %) 53613 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 26.9 +/- 18.6 Average RMSD (Å) : 1.300 +/- 0.500 Consensus geometry
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Consensus Sequence: | XXXXXVppXE |
(φψ)-conformation: | aalbpbabaa |
Pattern: | x | [TV] | x | [ALW] | [CE] | [IK] | [HL] | [ACT] | [EG] | x | [AKR] | [V] | [EKN] | [HN] | [DTV] | [E] | [DE] | [A] | [AKV] | x | [AI] | [AV] | [QR] | x | [HL] | [HIL] |
Conservation: | -1.245 | 0.322 | -0.583 | -0.823 | -0.396 | -0.731 | -0.441 | -0.063 | 0.029 | -0.992 | -0.232 | 1.626 | 0.106 | 1.576 | -0.823 | 2.386 | 1.432 | 1.626 | -0.823 | -0.738 | -0.162 | 0.196 | 1.010 | -1.076 | -0.441 | -0.738 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ed1_A_73 | 1ed1 | A | 83 | 108 | CVIWCIHAEEKVKHTEEAKQIVQRHL | HHHHHHHTT---SBHHHHHHHHHHHH | aaaaaaaavxxbabaaaaaaaaaaaa |
1rkd_*_188 | 1rkd | - | 188 | 213 | ETEAEKLTGIRVENDEDAAKAAQVLH | HHHHHHHHS---SSHHHHHHHHHHHH | aaaaaaaavbxbabaaaaaaaaaaaa |
1vi9_A_147 | 1vi9 | A | 147 | 172 | LVELEILCEHAVNNVEEAVLAARELI | HHHHHHHHTS---SHHHHHHHHHHHH | aaaaaaaavbxbabaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ed1_A_73 | 1ed1 | A | IPAISOPROPYL ALCOHOL | L - 75 |
1ed1_A_73 | 1ed1 | A | IPAISOPROPYL ALCOHOL | H - 96 |
1ed1_A_73 | 1ed1 | A | IPAISOPROPYL ALCOHOL | E - 98 |
1ed1_A_73 | 1ed1 | A | IPAISOPROPYL ALCOHOL | E - 99 |
1ed1_A_73 | 1ed1 | A | IPAISOPROPYL ALCOHOL | Q - 102 |
1rkd_*_188 | 1rkd | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 188 |
1rkd_*_188 | 1rkd | * | PO4PHOSPHATE ION | T - 189 |
1rkd_*_188 | 1rkd | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 190 |
1rkd_*_188 | 1rkd | * | PO4PHOSPHATE ION | E - 190 |
1vi9_A_147 | 1vi9 | A | MSESELENOMETHIONINE | V - 148 |
1vi9_A_147 | 1vi9 | A | MSESELENOMETHIONINE | E - 149 |
1vi9_A_147 | 1vi9 | A | MSESELENOMETHIONINE | I - 152 |
1vi9_A_147 | 1vi9 | A | MSESELENOMETHIONINE | L - 153 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1rkd_*_188 | 1rkd | * | AB2RESIDUES MAKING WATER-MEDIATED HYDROGEN BONDS WITH ADP. | E - 190 |
Clusters included in this Subclass |
CLUSTER: HH.6.133 |