Information on SUBCLASS 8.5.1 |
Subclass Accession number: 2526
Subclass: 8.5.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1 (>75 %) 3.2.1.83.2.1.8 GO : GO:0004553 (>50 %) GO:0004553 (>75 %) GO:0005515 (>75 %) GO:0008565 (>75 %) GO:0016798 (>50 %) GO:0016798 (>75 %) SCOP : 48370 (>75 %) 48464 (>75 %) 48468 (>75 %) 51350 (>75 %) 51445 (>75 %) 51445 (>75 %) 51487 (>75 %) 51487 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 28.7 +/- 22.5 Average RMSD (Å) : 0.420 +/- 0.110 Consensus geometry
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Consensus Sequence: | hhpPppGpFcFX |
(φψ)-conformation: | aababplbpbaa |
Pattern: | [FMPW] | x | x | [ILMT] | [EQ] | [P] | [ERST] | [EPQ] | [GN] | [knr] | [FL] | [DEN] | [FW] | [AEGST] | [gknq] | [AGL] | [D] | [eqry] | [AFIL] | [ILV] | [ADKN] | [FTW] | [AL] | [AEKQT] |
Conservation: | -0.477 | -0.938 | -0.902 | -0.279 | 0.786 | 2.685 | -0.543 | -0.007 | 0.906 | -0.788 | 0.778 | 0.354 | 1.265 | -0.787 | -1.027 | -0.625 | 2.139 | -0.874 | -0.576 | 0.375 | -0.854 | 0.110 | -0.022 | -0.700 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hiz_A_64 | 1hiz | A | 64 | 87 | PISIQPEEGKFNFEQADRIVKFAK | HHHH-SBTTB---HHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaa |
1i1w_A_51 | 1i1w | A | 51 | 74 | WDATEPSQGNFNFAGADYLVNWAQ | HHHH-SBTTB---HHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaa |
1kwg_A_38 | 1kwg | A | 38 | 61 | WALLEPEPGRLEWGWLDEAIATLA | HHHH-SBTTB---HHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaa |
1us3_A_300 | 1us3 | A | 300 | 323 | MSYMQPTEGNFNFTNADAFVDWAT | HHHH-SBTTB---HHHHHHHHHHH | aaaababxvbxbaaaaaaaaaaaa |
1xyz_A_564 | 1xyz | A | 564 | 587 | FDALQPRQNVFDFSKGDQLLAFAE | HHHH-SBTTB---HHHHHHHHHHH | aaaababxvbbbaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | F - 63 |
1i1w_A_51 | 1i1w | A | ACNACETONE | F - 63 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | A - 66 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | D - 67 |
1i1w_A_51 | 1i1w | A | ACNACETONE | D - 67 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | V - 70 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | N - 71 |
Clusters included in this Subclass |
CLUSTER: HH.8.8 |