ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.7.1

Subclass Accession number: 2528
Subclass: 8.7.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7.7 (>75 %) 2.7.7.7
SCOP : 53066 (>75 %) 53098 (>75 %) 53118 (>75 %) 56234 (>75 %) 56235 (>75 %) 56236 (>75 %)

Number of loops: 4

Average sequence ID (%) : 16.1 +/- 15.0
Average RMSD (Å) : 1.000 +/- 0.316

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 90-135

rho (°): 270-315

Consensus Sequence:	pXhXpXNXhphp
(φψ)-conformation:	aagpbaaappaa

Pattern:	x	[ADKR]	x	[EGNS]	[FKMQ]	x	x	[EH]	[LW]	x	x	x	x	[GV]	[IKL]	[DT]	x	[AN]	x	[ALV]	[QST]	x	[DER]	[DQ]	x	[KQY]	x	[AIL]
Conservation:	-0.762	-0.697	-0.826	-0.112	-0.762	-1.151	-0.671	2.066	1.438	-0.762	-1.021	-0.100	0.173	0.920	-0.204	1.004	-1.476	1.448	-0.697	0.079	0.437	-1.050	0.869	2.365	-0.601	0.390	-0.245	-0.054

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a0p_*_23	1a0p	-	31	58	RDLSMMVEWLHHRGLTLATAQSDDLQAL	HHHHHHHHHHHHTS--TTT--HHHHHHH	aaaaaaaaaaaaagpbaaapbaaaaaaa
1a8i_*_21	1a8i	-	27	54	LKKNFNRHLHFTLVKDRNVATPRDYYFA	HHHHHHHHHHHTT---TTT--HHHHHHH	aaaaaaaaaaaaavbbaaaxxaaaaaaa
1k7w_A_386	1k7w	A	391	418	TASGKAVHLAETKGITINKLSLEDLKSI	HHHHHHHHHHHTTT--GGG--HHHHHHH	aaaaaaaaaaaaavbxaaaxxaaaaaaa
1omh_A_234	1omh	A	234	261	KRTEQIAEWYAARGLDPNSVSLEQKQAA	HHHHHHHHHHHHHT--TTT--HHHHHHH	aaaaaaaaaaaaavxxaaapxaaaaaaa

Clusters included in this Subclass

CLUSTER: HH.9.7