Information on SUBCLASS 3.16.1 |
Subclass Accession number: 253
Subclass: 3.16.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005351 (>75 %) GO:0005386 (>75 %) GO:0015144 (>75 %) GO:0015290 (>75 %) GO:0015291 (>75 %) GO:0051119 (>75 %) SCOP : 55593 (>75 %) 55594 (>75 %) 55595 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 22.2 +/- 16.5 Average RMSD (Å) : 0.567 +/- 0.231 Consensus geometry
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Consensus Sequence: | XpXGXIX |
(φψ)-conformation: | aaplpbb |
Pattern: | x | [AVY] | [FLW] | [HNR] | [AK] | x | [HRT] | x | [G] | x | [I] | [LMT] |
Conservation: | -0.957 | -0.606 | 0.095 | 0.235 | -0.084 | -0.375 | -0.396 | -0.817 | 2.550 | -0.677 | 1.287 | -0.256 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1avq_A_22 | 1avq | A | 22 | 33 | DAWHKLRLGVIT | HHHHHTTTT-EE | aaaaaaapvxxb |
1set_A_227 | 1set | A | 228 | 239 | VVLNALHSGEIL | HHHHHTTTT-EE | aaaaaaapvxbx |
3dfr_*_24 | 3dfr | - | 28 | 39 | HYFRAQTVGKIM | HHHHHTTTTSEE | aaaaaaapvbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | W - 24 |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | R - 28 |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | T - 33 |
1set_A_227 | 1set | A | SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE | E - 227 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | P - 24 |
3dfr_*_24 | 3dfr | * | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | D - 26 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | D - 26 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | L - 27 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | H - 28 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | Y - 29 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | F - 30 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | R - 31 |
3dfr_*_24 | 3dfr | * | MTXMETHOTREXATE | T - 34 |
3dfr_*_24 | 3dfr | * | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 41 |
3dfr_*_24 | 3dfr | * | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | G - 42 |
Clusters included in this Subclass |
CLUSTER: HE.4.168 |
CLUSTER: HE.5.170 |