ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.9.1

Subclass Accession number: 2530
Subclass: 8.9.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.17 (>50 %)  1.17 (>75 %)  1.17.4 (>50 %)  1.17.4 (>75 %)  1.17.4.1 1.17.4.1 1.7 (>50 %)  1.7.2 (>50 %)  1.7.2.3
GO : GO:0004748 (>75 %)  GO:0004748 (>75 %)  GO:0016725 (>75 %)  GO:0016725 (>75 %)  GO:0016728 (>75 %)  GO:0016728 (>75 %)  GO:0030151 (>50 %)
SCOP : 47239 (>75 %)  47239 (>75 %)  47240 (>75 %)  47240 (>75 %)  47253 (>75 %)  47253 (>75 %)  53705 (>75 %)  53706 (>75 %)  53707 (>75 %)

Number of loops: 3

Average sequence ID (%) : 26.7 +/- 16.8
Average RMSD (Å) : 0.533 +/- 0.058

Consensus geometry

d (Å): 29

delta (°): 0-45

theta (°): 45-90

rho (°): 45-90

Consensus Sequence:	XXFWXhEphXhS
(φψ)-conformation:	aapbbaaabpaa

Pattern:	[DEH]	x	x	x	[EKQ]	[LMV]	[IWY]	[DEK]	[KR]	x	x	[AGS]	x	[F]	[W]	x	[AP]	[E]	[EK]	[IV]	[DP]	[LV]	[S]	[KNR]	[D]	x	x	[DHS]	[WY]	[ENQ]
Conservation:	-0.171	-1.130	-0.987	-0.987	-0.076	-0.171	-0.315	-0.219	0.378	-0.939	-0.987	-0.411	-0.795	1.411	3.568	-0.891	0.093	0.979	0.178	0.347	0.067	-0.046	0.548	-0.219	1.411	-0.790	-0.670	-0.507	1.550	-0.219

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1h0o_A_89	1h0o	A	89	118	HDIWQMYKKAEASFWTAEEVDLSKDIQHWE	HHHHHHHHHHHHT---GGGS--TTHHHHHH	aaaaaaaaaaaaapbbaaabxaaNaaaaaa
1kgn_A_27	1kgn	A	27	56	EKDLEVWDRLTGNFWLPEKIPVSNDIQSWN	HHHHHHHHHHHHT---GGGS-GGGGHHHHH	aaaaaaaaaaaaapbbaaabxaaaaaaaaa
1mxr_A_34	1mxr	A	34	63	DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ	HHHHHHHHHHHHT---GGGS--TTHHHHHH	aaaaaaaaaaaaapbbaaaxxaaaaaaaaa

Clusters included in this Subclass