Information on SUBCLASS 8.11.1 |
Subclass Accession number: 2532
Subclass: 8.11.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.174.1 (>75 %) 4.1.2 (>75 %) 4.1.2.13 GO : GO:0003796 (>75 %) GO:0004332 (>75 %) GO:0004553 (>75 %) GO:0005515 (>50 %) GO:0008565 (>50 %) GO:0016798 (>75 %) GO:0016829 (>75 %) GO:0016830 (>75 %) GO:0016832 (>75 %) SCOP : 48370 (>75 %) 48464 (>75 %) 48468 (>75 %) 51569 (>75 %) 51570 (>75 %) 53954 (>75 %) 53955 (>75 %) 53960 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 31.0 +/- 16.4 Average RMSD (Å) : 0.367 +/- 0.058 Consensus geometry
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Consensus Sequence: | ATpXXXXpXDWh |
(φψ)-conformation: | aapaapabppaa |
Pattern: | [FLV] | x | [AKQ] | [NR] | [IL] | [EN] | [KNR] | [A] | [T] | [DNS] | x | x | x | x | [ES] | x | [D] | [W] | [AP] | x | x | x | x | [FI] | [C] | [DE] | x | [IL] |
Conservation: | -0.405 | -0.923 | -0.492 | 0.085 | 0.185 | 0.081 | -0.146 | 0.544 | 0.933 | -0.146 | -0.621 | -0.541 | -0.794 | -0.664 | -0.025 | -0.923 | 1.321 | 3.264 | -0.201 | -0.541 | -0.616 | -0.621 | -1.139 | -0.074 | 2.487 | 0.545 | -0.751 | 0.182 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dvp_A_5 | 1dvp | A | 6 | 33 | FCKNLENATSHLRLEPDWPSILLICDEI | HHHHHHHHH-TT-SS--HHHHHHHHHHH | aaaaaaaaapaaxabpxaaaaaaaaaaa |
1elk_A_12 | 1elk | A | 13 | 40 | VGQRIEKATDGSLQSEDWALNMEICDII | HHHHHHHHT-TT-SS--HHHHHHHHHHH | aaaaaaaaaxaaxabpbaaaaaaaaaaa |
1ujk_A_10 | 1ujk | A | 10 | 37 | LEARINRATNPLNKELDWASINGFCEQL | HHHHHHHHT-TT-SS--HHHHHHHHHHH | aaaaaaaaapaaxabpxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ujk_A_10 | 1ujk | A | IODIODIDE ION | I - 14 |
1ujk_A_10 | 1ujk | A | IODIODIDE ION | N - 15 |
Clusters included in this Subclass |
CLUSTER: HH.8.37 |