Information on SUBCLASS 8.12.1 |
Subclass Accession number: 2533
Subclass: 8.12.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>50 %) 2.7 (>75 %) 2.7.1 (>50 %) 2.7.3 (>75 %) 2.7.3.2 (>75 %) 3.4 (>75 %) 3.4.22 (>75 %) 3.4.22.40 GO : GO:0004111 (>75 %) GO:0004175 (>50 %) GO:0004197 (>50 %) GO:0004672 (>50 %) GO:0005524 (>50 %) GO:0008233 (>50 %) GO:0008234 (>50 %) GO:0016301 (>50 %) GO:0016301 (>75 %) GO:0016772 (>50 %) GO:0016772 (>75 %) GO:0016773 (>50 %) GO:0016775 (>75 %) SCOP : 48033 (>75 %) 48034 (>75 %) 48035 (>75 %) 54000 (>75 %) 54001 (>75 %) 54002 (>75 %) 56111 (>50 %) 56112 (>50 %) 88854 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 26.3 +/- 24.0 Average RMSD (Å) : 0.700 +/- 0.265 Consensus geometry
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Consensus Sequence: | XpXXXXXShpXX |
(φψ)-conformation: | aapaaaaapbaa |
Pattern: | [A] | [KNQ] | [ET] | [LV] | [KMV] | [EQ] | x | [KPR] | [FQ] | [FH] | x | [S] | [IL] | [DNT] | [TW] | [GQ] | x | [FV] | x |
Conservation: | 1.597 | -0.119 | -0.019 | 0.360 | -0.882 | 1.218 | -0.977 | -0.405 | -0.536 | 0.703 | -1.549 | 1.597 | 0.819 | -0.215 | 1.415 | -0.293 | -0.977 | -0.188 | -1.549 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ew6_A_77 | 1ew6 | A | 80 | 98 | ANTLVQMKQHSSLTTGNFE | HHHHHS-GGGTT--HHHHH | aaaaaaxaaaaaxbaaaaa |
1o6l_A_400 | 1o6l | A | 400 | 418 | AKEVMEHRFFLSINWQDVV | HHHHHTSGGGTT--HHHHH | aaaaaaxaaaaaxbaaaaa |
1omw_A_444 | 1omw | A | 444 | 462 | AQEVKESPFFRSLDWQMVF | HHHHHTSGGGTT--HHHHH | aaaaaaxaaaaaxbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 83 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 86 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 88 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 89 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 92 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | N - 96 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 97 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 100 |
1ew6_A_77 | 1ew6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 101 |
Clusters included in this Subclass |
CLUSTER: HH.8.31 |