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Information on SUBCLASS 8.12.1
Subclass Accession number: 2533
Subclass: 8.12.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>50 %)  2.7 (>75 %)  2.7.1 (>50 %)  2.7.3 (>75 %)  2.7.3.2 (>75 %)  3.4 (>75 %)  3.4.22 (>75 %)  3.4.22.40
GO : GO:0004111 (>75 %)  GO:0004175 (>50 %)  GO:0004197 (>50 %)  GO:0004672 (>50 %)  GO:0005524 (>50 %)  GO:0008233 (>50 %)  GO:0008234 (>50 %)  GO:0016301 (>50 %)  GO:0016301 (>75 %)  GO:0016772 (>50 %)  GO:0016772 (>75 %)  GO:0016773 (>50 %)  GO:0016775 (>75 %)  
SCOP : 48033 (>75 %)  48034 (>75 %)  48035 (>75 %)  54000 (>75 %)  54001 (>75 %)  54002 (>75 %)  56111 (>50 %)  56112 (>50 %)  88854 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 26.3 +/- 24.0
Average RMSD (Å) : 0.700 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpXXXXXShpXX
(φψ)-conformation: aapaaaaapbaa
Pattern: [A][KNQ][ET][LV][KMV][EQ]x[KPR][FQ][FH]x[S][IL][DNT][TW][GQ]x[FV]x
Conservation:1.597-0.119-0.0190.360-0.8821.218-0.977-0.405-0.5360.703-1.5491.5970.819-0.2151.415-0.293-0.977-0.188-1.549
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ew6_A_771ew6   A8098ANTLVQMKQHSSLTTGNFEHHHHHS-GGGTT--HHHHHaaaaaaxaaaaaxbaaaaa
1o6l_A_4001o6l   A400418AKEVMEHRFFLSINWQDVVHHHHHTSGGGTT--HHHHHaaaaaaxaaaaaxbaaaaa
1omw_A_4441omw   A444462AQEVKESPFFRSLDWQMVFHHHHHTSGGGTT--HHHHHaaaaaaxaaaaaxbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 83
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 86
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 88
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 89
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 92
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 96
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 97
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 100
1ew6_A_771ew6   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 101

Clusters included in this Subclass
CLUSTER: HH.8.31