ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.14.1

Subclass Accession number: 2535
Subclass: 8.14.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)  1.1.1.49
GO : GO:0004345 (>50 %)  GO:0005509 (>75 %)  GO:0016614 (>50 %)  GO:0016616 (>50 %)
SCOP : 47472 (>75 %)  47473 (>75 %)  55346 (>50 %)  55347 (>50 %)  55376 (>50 %)  63550 (>75 %)

Number of loops: 3

Average sequence ID (%) : 8.6 +/- 9.0
Average RMSD (Å) : 1.067 +/- 0.379

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	XhXXpXhpIXXX
(φψ)-conformation:	aabpaapppbaa

Pattern:	x	[AER]	[AGN]	[FMV]	[AV]	[HQR]	[AIL]	[CMV]	[HK]	[AGN]	[AFL]	[FIT]	[NP]	[DEQ]	[GNT]	[AFG]	[KT]	[I]	[ADT]	[ADK]	x	[AM]	x	[AEN]	[ACS]	x	[QWY]	[EQT]	[CTY]	[ALV]	x
Conservation:	-1.636	-0.469	-0.210	0.179	0.822	0.827	-0.210	0.309	1.333	-0.210	-0.729	-0.599	1.562	1.346	-0.080	-0.988	0.931	2.902	-0.599	-0.858	-1.377	0.421	-1.247	-0.599	0.438	-1.247	0.957	0.179	-0.340	-0.210	-0.599

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j1i_A_160	1j1i	A	160	190	REGMVHLVKALTNDGFKIDDAMINSRYTYAT	HHHHHHHHHHHS-TT----HHHHHHHHHHHH	aaaaaaaaaaabxaaxxxbaaaaaaaaaaaa
1n1j_A_59	1n1j	A	59	89	IANVARIMKNAIPQTGKIAKDAKECVQECVS	HHHHHHHHHHTS-TT----HHHHHHHHHHHH	aaaaaaaaaaabwaaxbbxaaaaaaaaaaaa
1qo0_A_263	1qo0	A	265	295	SRAFVQACHGFFPENATITAWAEAAYWQTLL	HHHHHHHHHHHS-TT----HHHHHHHHHHHH	aaaaaaaaaaaxxaabxxbaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1qo0_A_263	1qo0	A	BMDBUTYRAMIDE	W - 285

Clusters included in this Subclass