ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.5.1

Subclass Accession number: 2540
Subclass: 9.5.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7 (>75 %)  2.7.7 (>75 %)  2.7.7.1 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.17 3.4 (>75 %)  3.4.24 (>50 %)
GO : GO:0000309 (>75 %)  GO:0003796 (>75 %)  GO:0004175 (>50 %)  GO:0004222 (>50 %)  GO:0004553 (>75 %)  GO:0008233 (>75 %)  GO:0008237 (>75 %)  GO:0008270 (>50 %)  GO:0008463 (>75 %)  GO:0016772 (>75 %)  GO:0016779 (>75 %)  GO:0016798 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0046914 (>50 %)
SCOP : 47089 (>75 %)  47090 (>75 %)  52373 (>75 %)  52374 (>75 %)  52397 (>75 %)  53954 (>75 %)  53955 (>75 %)  53960 (>75 %)  56419 (>75 %)  56420 (>75 %)  56421 (>75 %)  63427 (>50 %)

Number of loops: 3

Average sequence ID (%) : 28.2 +/- 18.8
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	XhXLXXpGXhcXX
(φψ)-conformation:	aalbppagbppaa

Pattern:	[GKV]	x	[AK]	[ILV]	x	x	[FLM]	[Q]	[KS]	x	[LY]	[GS]	[L]	[AEP]	x	[DT]	[G]	x	[AL]	[DG]	[PS]	[AD]	[T]	[FL]	[EKN]	[AKV]
Conservation:	-1.316	-0.657	-0.181	0.368	-0.803	-1.096	0.002	1.906	0.249	-1.169	-0.020	0.600	1.247	-0.657	-0.876	0.132	2.565	-1.096	-0.313	0.382	-0.020	-0.400	1.906	0.194	-0.071	-0.876

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1l6j_A_68	1l6j	A	68	93	GPALLLLQKQLSLPETGELDSATLKA	HHHHHHHHHHHT----SS--HHHHHH	aaaaaaaaaaavxpxavbxxaaaaaa
1lbu_*_44	1lbu	-	47	72	KAAVQRFQSAYGLAADGIAGPATFNK	HHHHHHHHHHTTS--SS-B-HHHHHH	aaaaaaaaaaavbxxavbxbaaaaaa
1slm_*_41	1slm	-	44	69	VKKIREMQKFLGLEVTGKLDSDTLEV	HHHHHHHHHHTT----SS--HHHHHH	aaaaaaaaaaavbxxagbxxaaaaaa

Clusters included in this Subclass