Information on SUBCLASS 13.1.1 |
Subclass Accession number: 2545
Subclass: 13.1.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.14 (>75 %) 1.14.16 (>75 %) GO : GO:0004497 (>75 %) GO:0005506 (>75 %) GO:0016597 (>50 %) GO:0016705 (>75 %) GO:0016714 (>75 %) GO:0043176 (>50 %) SCOP : 48403 (>75 %) 48403 (>75 %) 48404 (>75 %) 48404 (>75 %) 56533 (>75 %) 56534 (>75 %) 56535 (>75 %) 74651 (>75 %) 74651 (>75 %) |
Number of loops: 23 Average sequence ID (%) : 28.7 +/- 21.7 Average RMSD (Å) : 0.513 +/- 0.251 Consensus geometry
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Consensus Sequence: | pXchphphXcpXcXphh |
(φψ)-conformation: | aagppaapbpaalppaa |
Pattern: | [acilmtv] | [ailtv] | [ehknqr] | [afiklmv] | [CL] | [hilvy] | [adegkqrst] | x | [fgkl] | [ASV] | [adgnpqs] | [aiptv] | [dehnrty] | [aivwy] | [aegkqrt] | [denst] | [dehknqrty] | x | [degkn] | [cehknqrstw] | [st] | [ACP] | [afilmv] | [dhq] | x |
Conservation: | -0.079 | -0.366 | -0.078 | -1.005 | 2.661 | 0.235 | -0.810 | -0.879 | -0.034 | 1.407 | 0.160 | -0.668 | -0.451 | -0.617 | -0.734 | 0.983 | -0.640 | -1.331 | 0.386 | -0.897 | 1.222 | 1.555 | 0.908 | 0.382 | -1.312 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1awc_B_117 | 1awc | B | 119 | 143 | VVELLIKYGADVHTQSKFCKTAFDI | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavpxaaxxxaavbxaaaa |
1awc_B_51 | 1awc | B | 53 | 77 | TTEVLLRAGVSRDARTKVDRTPLHM | HHHHHHTTT--TT---TT---HHHH | aaaaaaaavxxaaxbxaavxbaaaa |
1awc_B_84 | 1awc | B | 86 | 110 | IVEVLLKHGADVNAKDMLKMTALHW | HHHHHHTTT--TT---TTS--HHHH | aaaaaaaavxxaapbxaalbbaaaa |
1bd8_*_21 | 1bd8 | - | 24 | 48 | VRRLLHRELVHPDALNRFGKTALQV | HHHHHHTT---TT---TTS--HHHH | aaaaaaaavxxaapxxaavbxaaaa |
1bd8_*_54 | 1bd8 | - | 56 | 80 | IALELLKQGASPNVQDTSGTSPVHD | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaagpxaapbxaavxbaaaa |
1bd8_*_87 | 1bd8 | - | 89 | 113 | TLKVLVEHGADVNVPDGTGALPIHL | HHHHHHHTT--S----TTS--HHHH | aaaaaaaavxxaaxxxaavxxaaaa |
1dcq_A_462 | 1dcq | A | 464 | 488 | CLKLLLRGKASIEIANESGETPLDI | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavxxaaxbxaavxbaaaa |
1ixv_A_120 | 1ixv | A | 122 | 146 | VSQFLIENGASVRIKDKFNQIPLHR | HHHHHHHTT--S----TTS--HHHH | aaaaaaaagxxaaxxxaavbbaaaa |
1ixv_A_153 | 1ixv | A | 156 | 180 | IELLCGLGKSAVNWQDKQGWTPLFH | HHHHHTTT---S----TTS--HHHH | aaaaaaaalpxaaxxxaavxxaaaa |
1k1a_A_177 | 1k1a | A | 179 | 203 | VVRLLVTAGASPMALDRHGQTAAHL | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaagxxaapxxaavxxaaaa |
1k1a_A_281 | 1k1a | A | 283 | 307 | MVQLLLQHGANVNAQMYSGSSALHS | HHHHHHHTT--TT-B-TTS-BHHHH | aaaaaaaavxxaapbxaavxbaaaa |
1ot8_A_133 | 1ot8 | A | 133 | 157 | MVEDLITADADINAADNSGKTALHW | HHHHHHHTT--TT-B-TTS-BHHHH | aaaaaaaavxxaaxbxaavxxaaaa |
1ot8_A_164 | 1ot8 | A | 166 | 190 | AVNILLMHHANRDAQDDKDETPLFL | HHHHHHHTT--TT---TT---HHHH | aaaaaaaavxxaapbxaalxxaaaa |
1ot8_A_197 | 1ot8 | A | 199 | 223 | ASKALLDNFANREITDHMDRLPRDV | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavxxaaxxxaavxxaaaa |
1ot8_A_64 | 1ot8 | A | 66 | 90 | AAKRLLDAGADANSQDNTGRTPLHA | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavpxaaxbxaavxbaaaa |
1oy3_D_107 | 1oy3 | D | 109 | 133 | TVEKLYAAGAGVLVAERGGHTALHL | HHHHHHHTT--SS---TTS--HHHH | aaaaaaaagxxaapbxaavxxaaaa |
1oy3_D_254 | 1oy3 | D | 256 | 280 | VLELLLKAGADPTARMYGGRTPLGS | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavxxaaxbxaagxbaaaa |
1sw6_A_331 | 1sw6 | A | 333 | 357 | LVKHLVKHGSNRLYGDNMGESCLVK | HHHHHHHTT--TTB--TT---HHHH | aaaaaaaagpxaaxxxaavxxaaaa |
1uoh_A_119 | 1uoh | A | 121 | 145 | IAVMLLEGGANPDAKDHYEATAMHR | HHHHHHHTT--TT---TTS--HHHH | aaaaaaaavpxaapbxaavbbaaaa |
1uoh_A_152 | 1uoh | A | 154 | 178 | MIHILLYYKASTNIQDTEGNTPLHL | HHHHHHHTT--S----TT---HHHH | aaaaaaaavxxaaxxxaavxxaaaa |
1uoh_A_185 | 1uoh | A | 187 | 211 | EAKLLVSQGASIYIENKEEKTPLQV | HHHHHHHTT--S----TTS--HHHH | aaaaaaaavxxaaxxxaavbxaaaa |
1uoh_A_53 | 1uoh | A | 55 | 79 | IVEFLLQLGVPVNDKDDAGWSPLHI | HHHHHHHHT--S----TT---HHHH | aaaaaaaagxwaaxbxaavxxaaaa |
1uoh_A_86 | 1uoh | A | 88 | 112 | IVKALLGKGAQVNAVNQNGCTPLHY | HHHHHHHTT--TT---TT---HHHH | aaaaaaaavpxaaxbxaavxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ot8_A_133 | 1ot8 | A | MGMAGNESIUM ION | E - 135 |
1ot8_A_133 | 1ot8 | A | MGMAGNESIUM ION | D - 136 |
Clusters included in this Subclass |
CLUSTER: HH.13.0 |
CLUSTER: HH.15.0 |
CLUSTER: HH.16.1 |