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Information on SUBCLASS 0.1.7
Subclass Accession number: 2557
Subclass: 0.1.7 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 11.8 +/- 18.1
Average RMSD (Å) : 0.664 +/- 0.162

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXXp
(φψ)-conformation: bbaa
Pattern: [afgilv]xx[acgns][enqrstwy][adegns][afgilvwy]
Conservation:1.377-1.040-0.8890.4940.9610.121-1.024
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a53_*_2291a53   -230236FLIGSSLEEE-HHHbbbaaaa
1ako_*_2411ako   -245251GIDYEIREE-HHHHebxaaaa
1dvj_A_1981dvj   A199205IIVGRSIEEE-HHHbbbaaaa
1eep_A_2811eep   A282288VMIGNLFEEE-HHHbxbaaaa
1gvo_A_3191gvo   A320326VAFGRDYEEESHHHbbbaaaa
1h3f_A_1231h3f   A125131LRYNSEWEEETHHHbbbaaaa
1h7w_A_8121h7w   A813819LQVCSAVEEESHHHbxbaaaa
1jil_A_1201jil   A121127LVNNRDWEEETHHHbbbaaaa
1ktb_A_111ktb   A1218GWLAWEREEESHHHebbaaaa
1los_C_21981los   C21992205IIVGASIEEE-HHHbbbaaaa
1n62_C_2241n62   C224230LWAEEAGEE-HHHHbxxaaaa
1ojx_A_2271ojx   A228234IAVGRNVEEESHHHbbbaaaa
1q6o_A_1871q6o   A188194FIAGRSIEEESHHHbbbaaaa
1thf_D_2201thf   D221227ALAASVFEEESHHHbxbaaaa
1thf_D_991thf   D100106VSINTAAEEESHHHbbbaaaa
1uas_A_111uas   A1218GWNSWNHEEESHHHebbaaaa
1vc4_A_2321vc4   A233239VLIGTSLEEE-HHHbbbaaaa
1vk4_A_1361vk4   A137143SADAQGFEEETHHHbbbaaaa
2tps_A_2042tps   A205211VSMISAIEEESHHHbbbaaaa
2ts1_*_1192ts1   -120126IKNNYDWEEETHHHbbbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a53_*_2291a53   *     IGPINDOLE-3-GLYCEROL PHOSPHATE L - 231
1a53_*_2291a53   *     IGPINDOLE-3-GLYCEROL PHOSPHATE I - 232
1a53_*_2291a53   *     IGPINDOLE-3-GLYCEROL PHOSPHATE G - 233
1a53_*_2291a53   *     IGPINDOLE-3-GLYCEROL PHOSPHATE S - 234
1a53_*_2291a53   *     IGPINDOLE-3-GLYCEROL PHOSPHATE S - 235
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE I - 200
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE V - 201
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE G - 202
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE R - 203
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE S - 204
1dvj_A_1981dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE Y - 206
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE A - 321
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE F - 322
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE G - 323
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE R - 324
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE D - 325
1gvo_A_3191gvo   A     FMNFLAVIN MONONUCLEOTIDE I - 327
1h3f_A_1231h3f   A     TYBTYROSINAL N - 128
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE Q - 814
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE V - 815
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE C - 816
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE S - 817
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE A - 818
1h7w_A_8121h7w   A     FMNFLAVIN MONONUCLEOTIDE Q - 820
1jil_A_1201jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID N - 124
1ktb_A_111ktb   A     CRYPROPANE-1,2,3-TRIOL W - 16
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE I - 2200
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE V - 2201
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE G - 2202
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE A - 2203
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE S - 2204
1los_C_21981los   C     UP66-AZA URIDINE 5'-MONOPHOSPHATE Y - 2206
1q6o_A_1871q6o   A     MGMAGNESIUM ION I - 189
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE I - 189
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE A - 190
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE G - 191
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE R - 192
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE S - 193
1q6o_A_1871q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE R - 195
1thf_D_991thf   D     PO4PHOSPHATE ION S - 101
1thf_D_991thf   D     PO4PHOSPHATE ION I - 102
1thf_D_991thf   D     PO4PHOSPHATE ION N - 103
1thf_D_991thf   D     PO4PHOSPHATE ION T - 104
1thf_D_991thf   D     PO4PHOSPHATE ION A - 105
1thf_D_2201thf   D     PO4PHOSPHATE ION L - 222
1thf_D_2201thf   D     PO4PHOSPHATE ION A - 223
1thf_D_2201thf   D     PO4PHOSPHATE ION A - 224
1thf_D_2201thf   D     PO4PHOSPHATE ION S - 225
1thf_D_2201thf   D     PO4PHOSPHATE ION V - 226
1uas_A_111uas   A     GOLGLYCEROL M - 11
1uas_A_111uas   A     GOLGLYCEROL G - 12
1uas_A_111uas   A     GALD-GALACTOSE W - 16
1vk4_A_1361vk4   A     MSESELENOMETHIONINE L - 136
2tps_A_2042tps   A     TPSTHIAMIN PHOSPHATE S - 206
2tps_A_2042tps   A     TPSTHIAMIN PHOSPHATE M - 207
2tps_A_2042tps   A     TPSTHIAMIN PHOSPHATE I - 208
2tps_A_2042tps   A     TPSTHIAMIN PHOSPHATE S - 209
2tps_A_2042tps   A     TPSTHIAMIN PHOSPHATE A - 210
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h7w_A_8121h7w   A AC5FMN BINDING SITE FOR CHAIN AC - 816
1h7w_A_8121h7w   A AC5FMN BINDING SITE FOR CHAIN AS - 817

Clusters included in this Subclass
CLUSTER: EH.0.10
CLUSTER: EH.1.20